Protein–RNA interactions for Protein: Q9HB31

SEBOX, Homeobox protein SEBOX, humanhuman

Predicted RBP Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEBOXQ9HB31 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SEBOXQ9HB31 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEBOXQ9HB31 AC092068.2-201ENST00000590491 1708 ntBASIC19■□□□□ 0.63
SEBOXQ9HB31 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEBOXQ9HB31 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SEBOXQ9HB31 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEBOXQ9HB31 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEBOXQ9HB31 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEBOXQ9HB31 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEBOXQ9HB31 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.99■□□□□ 0.63
SEBOXQ9HB31 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.99■□□□□ 0.63
SEBOXQ9HB31 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SEBOXQ9HB31 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEBOXQ9HB31 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEBOXQ9HB31 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEBOXQ9HB31 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.99■□□□□ 0.63
SEBOXQ9HB31 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SEBOXQ9HB31 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.99■□□□□ 0.63
SEBOXQ9HB31 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SEBOXQ9HB31 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SEBOXQ9HB31 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
SEBOXQ9HB31 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEBOXQ9HB31 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.98■□□□□ 0.63
SEBOXQ9HB31 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.98■□□□□ 0.63
SEBOXQ9HB31 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEBOXQ9HB31 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEBOXQ9HB31 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SEBOXQ9HB31 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEBOXQ9HB31 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.98■□□□□ 0.63
SEBOXQ9HB31 AC092028.1-203ENST00000608262 953 ntBASIC18.98■□□□□ 0.63
SEBOXQ9HB31 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEBOXQ9HB31 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SEBOXQ9HB31 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SEBOXQ9HB31 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEBOXQ9HB31 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEBOXQ9HB31 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
SEBOXQ9HB31 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.98■□□□□ 0.63
SEBOXQ9HB31 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.97■□□□□ 0.63
SEBOXQ9HB31 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.97■□□□□ 0.63
SEBOXQ9HB31 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEBOXQ9HB31 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEBOXQ9HB31 KRT125P-201ENST00000546827 989 ntBASIC18.97■□□□□ 0.63
SEBOXQ9HB31 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.97■□□□□ 0.63
SEBOXQ9HB31 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEBOXQ9HB31 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.97■□□□□ 0.63
SEBOXQ9HB31 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEBOXQ9HB31 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEBOXQ9HB31 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SEBOXQ9HB31 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.96■□□□□ 0.63
SEBOXQ9HB31 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEBOXQ9HB31 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SEBOXQ9HB31 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.96■□□□□ 0.63
SEBOXQ9HB31 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SEBOXQ9HB31 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SEBOXQ9HB31 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEBOXQ9HB31 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SEBOXQ9HB31 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SEBOXQ9HB31 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEBOXQ9HB31 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.96■□□□□ 0.63
SEBOXQ9HB31 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEBOXQ9HB31 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEBOXQ9HB31 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEBOXQ9HB31 DUSP8P5-201ENST00000422884 1815 ntBASIC18.95■□□□□ 0.62
SEBOXQ9HB31 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEBOXQ9HB31 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.95■□□□□ 0.62
SEBOXQ9HB31 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEBOXQ9HB31 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.95■□□□□ 0.62
SEBOXQ9HB31 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SEBOXQ9HB31 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.95■□□□□ 0.62
SEBOXQ9HB31 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEBOXQ9HB31 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.95■□□□□ 0.62
SEBOXQ9HB31 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.95■□□□□ 0.62
SEBOXQ9HB31 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.95■□□□□ 0.62
SEBOXQ9HB31 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEBOXQ9HB31 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.95■□□□□ 0.62
SEBOXQ9HB31 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEBOXQ9HB31 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SEBOXQ9HB31 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SEBOXQ9HB31 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEBOXQ9HB31 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
SEBOXQ9HB31 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEBOXQ9HB31 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SEBOXQ9HB31 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.94■□□□□ 0.62
SEBOXQ9HB31 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.94■□□□□ 0.62
SEBOXQ9HB31 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.94■□□□□ 0.62
SEBOXQ9HB31 ANOS2P-203ENST00000472227 1816 ntBASIC18.94■□□□□ 0.62
SEBOXQ9HB31 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEBOXQ9HB31 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SEBOXQ9HB31 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SEBOXQ9HB31 AC005703.6-201ENST00000623265 1329 ntBASIC18.94■□□□□ 0.62
SEBOXQ9HB31 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEBOXQ9HB31 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEBOXQ9HB31 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SEBOXQ9HB31 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEBOXQ9HB31 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.93■□□□□ 0.62
SEBOXQ9HB31 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEBOXQ9HB31 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEBOXQ9HB31 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.93■□□□□ 0.62
SEBOXQ9HB31 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEBOXQ9HB31 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms