Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.96■□□□□ 0.95
TMEM38AQ9H6F2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.96■□□□□ 0.95
TMEM38AQ9H6F2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.96■□□□□ 0.95
TMEM38AQ9H6F2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.96■□□□□ 0.95
TMEM38AQ9H6F2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM38AQ9H6F2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM38AQ9H6F2 LINC00526-201ENST00000581067 1875 ntBASIC20.96■□□□□ 0.95
TMEM38AQ9H6F2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM38AQ9H6F2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.96■□□□□ 0.95
TMEM38AQ9H6F2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM38AQ9H6F2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
TMEM38AQ9H6F2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM38AQ9H6F2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM38AQ9H6F2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM38AQ9H6F2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM38AQ9H6F2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
TMEM38AQ9H6F2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM38AQ9H6F2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.95■□□□□ 0.94
TMEM38AQ9H6F2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.95■□□□□ 0.94
TMEM38AQ9H6F2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
TMEM38AQ9H6F2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.95■□□□□ 0.94
TMEM38AQ9H6F2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.95■□□□□ 0.94
TMEM38AQ9H6F2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.95■□□□□ 0.94
TMEM38AQ9H6F2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.95■□□□□ 0.94
TMEM38AQ9H6F2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM38AQ9H6F2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM38AQ9H6F2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM38AQ9H6F2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.94■□□□□ 0.94
TMEM38AQ9H6F2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM38AQ9H6F2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TMEM38AQ9H6F2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM38AQ9H6F2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TMEM38AQ9H6F2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.94■□□□□ 0.94
TMEM38AQ9H6F2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.94■□□□□ 0.94
TMEM38AQ9H6F2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.94■□□□□ 0.94
TMEM38AQ9H6F2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.94■□□□□ 0.94
TMEM38AQ9H6F2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM38AQ9H6F2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM38AQ9H6F2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM38AQ9H6F2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.94■□□□□ 0.94
TMEM38AQ9H6F2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TMEM38AQ9H6F2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM38AQ9H6F2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM38AQ9H6F2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TMEM38AQ9H6F2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.93■□□□□ 0.94
TMEM38AQ9H6F2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM38AQ9H6F2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM38AQ9H6F2 AL353803.4-201ENST00000565882 1934 ntBASIC20.92■□□□□ 0.94
TMEM38AQ9H6F2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TMEM38AQ9H6F2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM38AQ9H6F2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM38AQ9H6F2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM38AQ9H6F2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.92■□□□□ 0.94
TMEM38AQ9H6F2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TMEM38AQ9H6F2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM38AQ9H6F2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM38AQ9H6F2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TMEM38AQ9H6F2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM38AQ9H6F2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.92■□□□□ 0.94
TMEM38AQ9H6F2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.92■□□□□ 0.94
TMEM38AQ9H6F2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.92■□□□□ 0.94
TMEM38AQ9H6F2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM38AQ9H6F2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM38AQ9H6F2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM38AQ9H6F2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.91■□□□□ 0.94
TMEM38AQ9H6F2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TMEM38AQ9H6F2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.91■□□□□ 0.94
TMEM38AQ9H6F2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM38AQ9H6F2 AC127496.7-201ENST00000625110 1798 ntBASIC20.91■□□□□ 0.94
TMEM38AQ9H6F2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM38AQ9H6F2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM38AQ9H6F2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.9■□□□□ 0.94
TMEM38AQ9H6F2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM38AQ9H6F2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM38AQ9H6F2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.9■□□□□ 0.94
TMEM38AQ9H6F2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM38AQ9H6F2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM38AQ9H6F2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM38AQ9H6F2 SNX5-217ENST00000606557 1087 ntBASIC20.9■□□□□ 0.94
TMEM38AQ9H6F2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.9■□□□□ 0.94
TMEM38AQ9H6F2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.9■□□□□ 0.94
TMEM38AQ9H6F2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TMEM38AQ9H6F2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
TMEM38AQ9H6F2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TMEM38AQ9H6F2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TMEM38AQ9H6F2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.89■□□□□ 0.93
TMEM38AQ9H6F2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM38AQ9H6F2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.89■□□□□ 0.93
TMEM38AQ9H6F2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.89■□□□□ 0.93
TMEM38AQ9H6F2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.89■□□□□ 0.93
TMEM38AQ9H6F2 AC242852.2-201ENST00000615738 1807 ntBASIC20.89■□□□□ 0.93
TMEM38AQ9H6F2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TMEM38AQ9H6F2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM38AQ9H6F2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM38AQ9H6F2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM38AQ9H6F2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.89■□□□□ 0.93
TMEM38AQ9H6F2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.89■□□□□ 0.93
TMEM38AQ9H6F2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM38AQ9H6F2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM38AQ9H6F2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms