Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
VPS16Q9H269 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.7■■□□□ 1.55
VPS16Q9H269 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
VPS16Q9H269 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
VPS16Q9H269 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.7■■□□□ 1.54
VPS16Q9H269 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
VPS16Q9H269 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
VPS16Q9H269 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
VPS16Q9H269 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.69■■□□□ 1.54
VPS16Q9H269 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
VPS16Q9H269 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.69■■□□□ 1.54
VPS16Q9H269 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
VPS16Q9H269 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.69■■□□□ 1.54
VPS16Q9H269 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
VPS16Q9H269 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
VPS16Q9H269 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
VPS16Q9H269 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
VPS16Q9H269 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.68■■□□□ 1.54
VPS16Q9H269 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
VPS16Q9H269 AC004448.1-201ENST00000458332 883 ntBASIC24.68■■□□□ 1.54
VPS16Q9H269 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
VPS16Q9H269 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.68■■□□□ 1.54
VPS16Q9H269 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.68■■□□□ 1.54
VPS16Q9H269 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
VPS16Q9H269 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
VPS16Q9H269 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
VPS16Q9H269 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
VPS16Q9H269 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
VPS16Q9H269 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
VPS16Q9H269 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.67■■□□□ 1.54
VPS16Q9H269 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.67■■□□□ 1.54
VPS16Q9H269 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
VPS16Q9H269 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
VPS16Q9H269 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
VPS16Q9H269 GUSBP5-202ENST00000510805 1989 ntBASIC24.66■■□□□ 1.54
VPS16Q9H269 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
VPS16Q9H269 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.66■■□□□ 1.54
VPS16Q9H269 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.66■■□□□ 1.54
VPS16Q9H269 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
VPS16Q9H269 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.66■■□□□ 1.54
VPS16Q9H269 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
VPS16Q9H269 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.66■■□□□ 1.54
VPS16Q9H269 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
VPS16Q9H269 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS16Q9H269 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VPS16Q9H269 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
VPS16Q9H269 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VPS16Q9H269 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.65■■□□□ 1.54
VPS16Q9H269 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VPS16Q9H269 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS16Q9H269 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS16Q9H269 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS16Q9H269 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
VPS16Q9H269 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS16Q9H269 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
VPS16Q9H269 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS16Q9H269 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
VPS16Q9H269 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.64■■□□□ 1.54
VPS16Q9H269 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS16Q9H269 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
VPS16Q9H269 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.64■■□□□ 1.53
VPS16Q9H269 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.64■■□□□ 1.53
VPS16Q9H269 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.63■■□□□ 1.53
VPS16Q9H269 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
VPS16Q9H269 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
VPS16Q9H269 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
VPS16Q9H269 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.63■■□□□ 1.53
VPS16Q9H269 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.63■■□□□ 1.53
VPS16Q9H269 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.63■■□□□ 1.53
VPS16Q9H269 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
VPS16Q9H269 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.63■■□□□ 1.53
VPS16Q9H269 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS16Q9H269 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS16Q9H269 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS16Q9H269 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS16Q9H269 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS16Q9H269 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS16Q9H269 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS16Q9H269 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS16Q9H269 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS16Q9H269 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
VPS16Q9H269 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.61■■□□□ 1.53
VPS16Q9H269 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.61■■□□□ 1.53
VPS16Q9H269 AL033527.3-201ENST00000566366 1196 ntBASIC24.61■■□□□ 1.53
VPS16Q9H269 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
VPS16Q9H269 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.61■■□□□ 1.53
VPS16Q9H269 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
VPS16Q9H269 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
VPS16Q9H269 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
VPS16Q9H269 LINC00565-201ENST00000562710 2331 ntBASIC24.6■■□□□ 1.53
VPS16Q9H269 MIR4508-201ENST00000584178 70 ntBASIC24.6■■□□□ 1.53
VPS16Q9H269 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
VPS16Q9H269 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
VPS16Q9H269 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
VPS16Q9H269 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.6■■□□□ 1.53
VPS16Q9H269 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
VPS16Q9H269 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
VPS16Q9H269 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
VPS16Q9H269 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
VPS16Q9H269 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms