Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2J2Q9GZM3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
POLR2J2Q9GZM3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.71■□□□□ 0.91
POLR2J2Q9GZM3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2J2Q9GZM3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.71■□□□□ 0.91
POLR2J2Q9GZM3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.71■□□□□ 0.91
POLR2J2Q9GZM3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.71■□□□□ 0.91
POLR2J2Q9GZM3 PVT1_1.1-201ENST00000615125 194 ntBASIC20.71■□□□□ 0.91
POLR2J2Q9GZM3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2J2Q9GZM3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
POLR2J2Q9GZM3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2J2Q9GZM3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2J2Q9GZM3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
POLR2J2Q9GZM3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2J2Q9GZM3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
POLR2J2Q9GZM3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2J2Q9GZM3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2J2Q9GZM3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.7■□□□□ 0.9
POLR2J2Q9GZM3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.7■□□□□ 0.9
POLR2J2Q9GZM3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2J2Q9GZM3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR2J2Q9GZM3 MIR4508-201ENST00000584178 70 ntBASIC20.7■□□□□ 0.9
POLR2J2Q9GZM3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR2J2Q9GZM3 EP400NL-214ENST00000641289 2402 ntBASIC20.7■□□□□ 0.9
POLR2J2Q9GZM3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2J2Q9GZM3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR2J2Q9GZM3 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR2J2Q9GZM3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2J2Q9GZM3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2J2Q9GZM3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR2J2Q9GZM3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2J2Q9GZM3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2J2Q9GZM3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR2J2Q9GZM3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.69■□□□□ 0.9
POLR2J2Q9GZM3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.69■□□□□ 0.9
POLR2J2Q9GZM3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR2J2Q9GZM3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR2J2Q9GZM3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.69■□□□□ 0.9
POLR2J2Q9GZM3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
POLR2J2Q9GZM3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR2J2Q9GZM3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2J2Q9GZM3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2J2Q9GZM3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
POLR2J2Q9GZM3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2J2Q9GZM3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2J2Q9GZM3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR2J2Q9GZM3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.68■□□□□ 0.9
POLR2J2Q9GZM3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2J2Q9GZM3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2J2Q9GZM3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2J2Q9GZM3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2J2Q9GZM3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
POLR2J2Q9GZM3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2J2Q9GZM3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2J2Q9GZM3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2J2Q9GZM3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2J2Q9GZM3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2J2Q9GZM3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2J2Q9GZM3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.67■□□□□ 0.9
POLR2J2Q9GZM3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.67■□□□□ 0.9
POLR2J2Q9GZM3 LINC00565-201ENST00000562710 2331 ntBASIC20.67■□□□□ 0.9
POLR2J2Q9GZM3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2J2Q9GZM3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.67■□□□□ 0.9
POLR2J2Q9GZM3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
POLR2J2Q9GZM3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
POLR2J2Q9GZM3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2J2Q9GZM3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2J2Q9GZM3 AC010980.1-201ENST00000587192 1142 ntBASIC20.66■□□□□ 0.9
POLR2J2Q9GZM3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2J2Q9GZM3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2J2Q9GZM3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
POLR2J2Q9GZM3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.65■□□□□ 0.9
POLR2J2Q9GZM3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2J2Q9GZM3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2J2Q9GZM3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
POLR2J2Q9GZM3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2J2Q9GZM3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR2J2Q9GZM3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.65■□□□□ 0.9
POLR2J2Q9GZM3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
POLR2J2Q9GZM3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2J2Q9GZM3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2J2Q9GZM3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
POLR2J2Q9GZM3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
POLR2J2Q9GZM3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.64■□□□□ 0.9
POLR2J2Q9GZM3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
POLR2J2Q9GZM3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
POLR2J2Q9GZM3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR2J2Q9GZM3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
POLR2J2Q9GZM3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.64■□□□□ 0.89
POLR2J2Q9GZM3 AC012354.3-201ENST00000623734 483 ntBASIC20.64■□□□□ 0.89
POLR2J2Q9GZM3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR2J2Q9GZM3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR2J2Q9GZM3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR2J2Q9GZM3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2J2Q9GZM3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2J2Q9GZM3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.63■□□□□ 0.89
POLR2J2Q9GZM3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.63■□□□□ 0.89
POLR2J2Q9GZM3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2J2Q9GZM3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2J2Q9GZM3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms