Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 AL355001.2-201ENST00000620617 1191 ntBASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 AC009086.3-201ENST00000623486 1008 ntBASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 AC099791.1-201ENST00000416440 715 ntBASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 RARRES2P6-201ENST00000567333 442 ntBASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 AC010525.1-201ENST00000585559 441 ntBASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 pRNA.6-201ENST00000610482 90 ntBASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 CA15P2-201ENST00000611168 834 ntBASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 pRNA.5-201ENST00000612139 90 ntBASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 pRNA.11-201ENST00000618423 90 ntBASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 pRNA.13-201ENST00000619112 90 ntBASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 H19-210ENST00000439725 1929 ntTSL 2 BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
KRTAP4-3Q9BYR4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 EDA-201ENST00000338901 1233 ntBASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 HES6-206ENST00000409574 738 ntTSL 2 BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
KRTAP4-3Q9BYR4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
KRTAP4-3Q9BYR4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
KRTAP4-3Q9BYR4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
KRTAP4-3Q9BYR4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
KRTAP4-3Q9BYR4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
KRTAP4-3Q9BYR4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
KRTAP4-3Q9BYR4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
KRTAP4-3Q9BYR4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC7.64□□□□□ -1.19
KRTAP4-3Q9BYR4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
KRTAP4-3Q9BYR4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC7.64□□□□□ -1.19
KRTAP4-3Q9BYR4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
KRTAP4-3Q9BYR4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
KRTAP4-3Q9BYR4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
KRTAP4-3Q9BYR4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
KRTAP4-3Q9BYR4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC7.64□□□□□ -1.19
KRTAP4-3Q9BYR4 SLC47A1P1-202ENST00000449666 945 ntBASIC7.64□□□□□ -1.19
KRTAP4-3Q9BYR4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
KRTAP4-3Q9BYR4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms