Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSBP3Q9BWW4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSBP3Q9BWW4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.71■□□□□ 0.59
SSBP3Q9BWW4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSBP3Q9BWW4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SSBP3Q9BWW4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSBP3Q9BWW4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSBP3Q9BWW4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
SSBP3Q9BWW4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SSBP3Q9BWW4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.71■□□□□ 0.59
SSBP3Q9BWW4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.71■□□□□ 0.59
SSBP3Q9BWW4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSBP3Q9BWW4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.71■□□□□ 0.59
SSBP3Q9BWW4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSBP3Q9BWW4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
SSBP3Q9BWW4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.7■□□□□ 0.58
SSBP3Q9BWW4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SSBP3Q9BWW4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSBP3Q9BWW4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SSBP3Q9BWW4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.7■□□□□ 0.58
SSBP3Q9BWW4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSBP3Q9BWW4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSBP3Q9BWW4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSBP3Q9BWW4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SSBP3Q9BWW4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.69■□□□□ 0.58
SSBP3Q9BWW4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSBP3Q9BWW4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.69■□□□□ 0.58
SSBP3Q9BWW4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSBP3Q9BWW4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.69■□□□□ 0.58
SSBP3Q9BWW4 AC009086.3-201ENST00000623486 1008 ntBASIC18.69■□□□□ 0.58
SSBP3Q9BWW4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSBP3Q9BWW4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSBP3Q9BWW4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSBP3Q9BWW4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSBP3Q9BWW4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSBP3Q9BWW4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.68■□□□□ 0.58
SSBP3Q9BWW4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.68■□□□□ 0.58
SSBP3Q9BWW4 AC024257.2-201ENST00000549699 147 ntBASIC18.68■□□□□ 0.58
SSBP3Q9BWW4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.68■□□□□ 0.58
SSBP3Q9BWW4 AC005837.3-201ENST00000612163 286 ntBASIC18.68■□□□□ 0.58
SSBP3Q9BWW4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.68■□□□□ 0.58
SSBP3Q9BWW4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SSBP3Q9BWW4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSBP3Q9BWW4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSBP3Q9BWW4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSBP3Q9BWW4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSBP3Q9BWW4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.67■□□□□ 0.58
SSBP3Q9BWW4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSBP3Q9BWW4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SSBP3Q9BWW4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.67■□□□□ 0.58
SSBP3Q9BWW4 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.67■□□□□ 0.58
SSBP3Q9BWW4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSBP3Q9BWW4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSBP3Q9BWW4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSBP3Q9BWW4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSBP3Q9BWW4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSBP3Q9BWW4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSBP3Q9BWW4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSBP3Q9BWW4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SSBP3Q9BWW4 SERBP1P1-201ENST00000396021 1160 ntBASIC18.66■□□□□ 0.58
SSBP3Q9BWW4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
SSBP3Q9BWW4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.66■□□□□ 0.58
SSBP3Q9BWW4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSBP3Q9BWW4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSBP3Q9BWW4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSBP3Q9BWW4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSBP3Q9BWW4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SSBP3Q9BWW4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.66■□□□□ 0.58
SSBP3Q9BWW4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSBP3Q9BWW4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 AL138724.1-201ENST00000606771 1088 ntBASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSBP3Q9BWW4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SSBP3Q9BWW4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSBP3Q9BWW4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SSBP3Q9BWW4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SSBP3Q9BWW4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.64■□□□□ 0.57
SSBP3Q9BWW4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSBP3Q9BWW4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.64■□□□□ 0.57
SSBP3Q9BWW4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.64■□□□□ 0.57
SSBP3Q9BWW4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.64■□□□□ 0.57
SSBP3Q9BWW4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms