Protein–RNA interactions for Protein: Q9BRT8

CBWD1, COBW domain-containing protein 1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1Q9BRT8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.62■■□□□ 1.53
CBWD1Q9BRT8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CBWD1Q9BRT8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CBWD1Q9BRT8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CBWD1Q9BRT8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CBWD1Q9BRT8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CBWD1Q9BRT8 AC079630.1-202ENST00000618127 1840 ntBASIC24.61■■□□□ 1.53
CBWD1Q9BRT8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.61■■□□□ 1.53
CBWD1Q9BRT8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.61■■□□□ 1.53
CBWD1Q9BRT8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.61■■□□□ 1.53
CBWD1Q9BRT8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.61■■□□□ 1.53
CBWD1Q9BRT8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CBWD1Q9BRT8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CBWD1Q9BRT8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.6■■□□□ 1.53
CBWD1Q9BRT8 AL512631.2-201ENST00000604634 923 ntBASIC24.6■■□□□ 1.53
CBWD1Q9BRT8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CBWD1Q9BRT8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CBWD1Q9BRT8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CBWD1Q9BRT8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CBWD1Q9BRT8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CBWD1Q9BRT8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CBWD1Q9BRT8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CBWD1Q9BRT8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.59■■□□□ 1.53
CBWD1Q9BRT8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.59■■□□□ 1.53
CBWD1Q9BRT8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.59■■□□□ 1.53
CBWD1Q9BRT8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CBWD1Q9BRT8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
CBWD1Q9BRT8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.58■■□□□ 1.53
CBWD1Q9BRT8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.58■■□□□ 1.53
CBWD1Q9BRT8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.58■■□□□ 1.53
CBWD1Q9BRT8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
CBWD1Q9BRT8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CBWD1Q9BRT8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CBWD1Q9BRT8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
CBWD1Q9BRT8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CBWD1Q9BRT8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
CBWD1Q9BRT8 AC092068.2-201ENST00000590491 1708 ntBASIC24.58■■□□□ 1.52
CBWD1Q9BRT8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CBWD1Q9BRT8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CBWD1Q9BRT8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
CBWD1Q9BRT8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CBWD1Q9BRT8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CBWD1Q9BRT8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
CBWD1Q9BRT8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CBWD1Q9BRT8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CBWD1Q9BRT8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.57■■□□□ 1.52
CBWD1Q9BRT8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CBWD1Q9BRT8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CBWD1Q9BRT8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CBWD1Q9BRT8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CBWD1Q9BRT8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.56■■□□□ 1.52
CBWD1Q9BRT8 C17orf82-201ENST00000623772 1530 ntBASIC24.56■■□□□ 1.52
CBWD1Q9BRT8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CBWD1Q9BRT8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CBWD1Q9BRT8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
CBWD1Q9BRT8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
CBWD1Q9BRT8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.56■■□□□ 1.52
CBWD1Q9BRT8 AC131281.2-201ENST00000520478 145 ntBASIC24.56■■□□□ 1.52
CBWD1Q9BRT8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.56■■□□□ 1.52
CBWD1Q9BRT8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
CBWD1Q9BRT8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CBWD1Q9BRT8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CBWD1Q9BRT8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.55■■□□□ 1.52
CBWD1Q9BRT8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.55■■□□□ 1.52
CBWD1Q9BRT8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CBWD1Q9BRT8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CBWD1Q9BRT8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.55■■□□□ 1.52
CBWD1Q9BRT8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CBWD1Q9BRT8 MIR4466-201ENST00000606121 54 ntBASIC24.55■■□□□ 1.52
CBWD1Q9BRT8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CBWD1Q9BRT8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CBWD1Q9BRT8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CBWD1Q9BRT8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CBWD1Q9BRT8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.55■■□□□ 1.52
CBWD1Q9BRT8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.55■■□□□ 1.52
CBWD1Q9BRT8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CBWD1Q9BRT8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.54■■□□□ 1.52
CBWD1Q9BRT8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.54■■□□□ 1.52
CBWD1Q9BRT8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CBWD1Q9BRT8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CBWD1Q9BRT8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CBWD1Q9BRT8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.54■■□□□ 1.52
CBWD1Q9BRT8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CBWD1Q9BRT8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CBWD1Q9BRT8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
CBWD1Q9BRT8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.53■■□□□ 1.52
CBWD1Q9BRT8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CBWD1Q9BRT8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CBWD1Q9BRT8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CBWD1Q9BRT8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CBWD1Q9BRT8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
CBWD1Q9BRT8 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.53■■□□□ 1.52
CBWD1Q9BRT8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.52■■□□□ 1.52
CBWD1Q9BRT8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.52■■□□□ 1.52
CBWD1Q9BRT8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.52■■□□□ 1.52
CBWD1Q9BRT8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
CBWD1Q9BRT8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.52■■□□□ 1.52
CBWD1Q9BRT8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.52■■□□□ 1.52
CBWD1Q9BRT8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.52■■□□□ 1.52
CBWD1Q9BRT8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms