Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
COL12A1Q99715 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL12A1Q99715 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.97■□□□□ 0.79
COL12A1Q99715 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
COL12A1Q99715 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
COL12A1Q99715 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COL12A1Q99715 AC098934.4-201ENST00000564127 592 ntBASIC19.97■□□□□ 0.79
COL12A1Q99715 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.97■□□□□ 0.79
COL12A1Q99715 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL12A1Q99715 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.97■□□□□ 0.79
COL12A1Q99715 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
COL12A1Q99715 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.97■□□□□ 0.79
COL12A1Q99715 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.97■□□□□ 0.79
COL12A1Q99715 BID-214ENST00000617586 542 ntTSL 5 BASIC19.97■□□□□ 0.79
COL12A1Q99715 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.96■□□□□ 0.79
COL12A1Q99715 AP004607.4-201ENST00000530158 1459 ntBASIC19.96■□□□□ 0.79
COL12A1Q99715 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL12A1Q99715 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL12A1Q99715 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COL12A1Q99715 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL12A1Q99715 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.96■□□□□ 0.79
COL12A1Q99715 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL12A1Q99715 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL12A1Q99715 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.96■□□□□ 0.79
COL12A1Q99715 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.95■□□□□ 0.78
COL12A1Q99715 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL12A1Q99715 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL12A1Q99715 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.95■□□□□ 0.78
COL12A1Q99715 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL12A1Q99715 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL12A1Q99715 AC004854.2-201ENST00000608450 1441 ntBASIC19.94■□□□□ 0.78
COL12A1Q99715 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL12A1Q99715 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.94■□□□□ 0.78
COL12A1Q99715 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL12A1Q99715 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL12A1Q99715 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL12A1Q99715 AL596275.1-201ENST00000423464 877 ntBASIC19.94■□□□□ 0.78
COL12A1Q99715 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
COL12A1Q99715 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COL12A1Q99715 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
COL12A1Q99715 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL12A1Q99715 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL12A1Q99715 IGHV3-19-201ENST00000521488 291 ntBASIC19.94■□□□□ 0.78
COL12A1Q99715 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.93■□□□□ 0.78
COL12A1Q99715 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.93■□□□□ 0.78
COL12A1Q99715 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.93■□□□□ 0.78
COL12A1Q99715 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL12A1Q99715 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL12A1Q99715 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL12A1Q99715 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
COL12A1Q99715 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.93■□□□□ 0.78
COL12A1Q99715 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.93■□□□□ 0.78
COL12A1Q99715 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.93■□□□□ 0.78
COL12A1Q99715 TPRG1LP1-201ENST00000598702 760 ntBASIC19.93■□□□□ 0.78
COL12A1Q99715 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.93■□□□□ 0.78
COL12A1Q99715 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.93■□□□□ 0.78
COL12A1Q99715 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL12A1Q99715 AC131274.2-201ENST00000580697 1507 ntBASIC19.93■□□□□ 0.78
COL12A1Q99715 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL12A1Q99715 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
COL12A1Q99715 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL12A1Q99715 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.93■□□□□ 0.78
COL12A1Q99715 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL12A1Q99715 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL12A1Q99715 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL12A1Q99715 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.92■□□□□ 0.78
COL12A1Q99715 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.92■□□□□ 0.78
COL12A1Q99715 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.92■□□□□ 0.78
COL12A1Q99715 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL12A1Q99715 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COL12A1Q99715 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
COL12A1Q99715 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL12A1Q99715 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL12A1Q99715 AC091060.1-201ENST00000623524 1766 ntBASIC19.92■□□□□ 0.78
COL12A1Q99715 AC083906.2-201ENST00000511578 360 ntBASIC19.91■□□□□ 0.78
COL12A1Q99715 SLC7A5P2-201ENST00000553010 536 ntBASIC19.91■□□□□ 0.78
COL12A1Q99715 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.91■□□□□ 0.78
COL12A1Q99715 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.91■□□□□ 0.78
COL12A1Q99715 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL12A1Q99715 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
COL12A1Q99715 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL12A1Q99715 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.91■□□□□ 0.78
COL12A1Q99715 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.91■□□□□ 0.78
COL12A1Q99715 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.9■□□□□ 0.78
COL12A1Q99715 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COL12A1Q99715 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
COL12A1Q99715 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.9■□□□□ 0.78
COL12A1Q99715 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL12A1Q99715 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL12A1Q99715 AL050303.2-201ENST00000619798 666 ntBASIC19.9■□□□□ 0.78
COL12A1Q99715 ERN1-208ENST00000606895 2068 ntBASIC19.9■□□□□ 0.78
COL12A1Q99715 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
COL12A1Q99715 AC073210.2-201ENST00000430369 194 ntBASIC19.89■□□□□ 0.78
COL12A1Q99715 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
COL12A1Q99715 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.78
COL12A1Q99715 LINC02228-203ENST00000641970 1355 ntBASIC19.89■□□□□ 0.78
COL12A1Q99715 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL12A1Q99715 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.89■□□□□ 0.77
COL12A1Q99715 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL12A1Q99715 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms