Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.4■□□□□ 0.7
HIST1H2AAQ96QV6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIST1H2AAQ96QV6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HIST1H2AAQ96QV6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.39■□□□□ 0.7
HIST1H2AAQ96QV6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.39■□□□□ 0.7
HIST1H2AAQ96QV6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HIST1H2AAQ96QV6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HIST1H2AAQ96QV6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
HIST1H2AAQ96QV6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIST1H2AAQ96QV6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.39■□□□□ 0.69
HIST1H2AAQ96QV6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HIST1H2AAQ96QV6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.39■□□□□ 0.69
HIST1H2AAQ96QV6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.39■□□□□ 0.69
HIST1H2AAQ96QV6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.39■□□□□ 0.69
HIST1H2AAQ96QV6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIST1H2AAQ96QV6 ANOS2P-203ENST00000472227 1816 ntBASIC19.39■□□□□ 0.69
HIST1H2AAQ96QV6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HIST1H2AAQ96QV6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HIST1H2AAQ96QV6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H2AAQ96QV6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H2AAQ96QV6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H2AAQ96QV6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H2AAQ96QV6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H2AAQ96QV6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H2AAQ96QV6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.38■□□□□ 0.69
HIST1H2AAQ96QV6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H2AAQ96QV6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
HIST1H2AAQ96QV6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HIST1H2AAQ96QV6 RARRES2P1-201ENST00000474487 481 ntBASIC19.38■□□□□ 0.69
HIST1H2AAQ96QV6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H2AAQ96QV6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H2AAQ96QV6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.38■□□□□ 0.69
HIST1H2AAQ96QV6 SNX5-217ENST00000606557 1087 ntBASIC19.38■□□□□ 0.69
HIST1H2AAQ96QV6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H2AAQ96QV6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HIST1H2AAQ96QV6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST1H2AAQ96QV6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.37■□□□□ 0.69
HIST1H2AAQ96QV6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.37■□□□□ 0.69
HIST1H2AAQ96QV6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST1H2AAQ96QV6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST1H2AAQ96QV6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HIST1H2AAQ96QV6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST1H2AAQ96QV6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST1H2AAQ96QV6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H2AAQ96QV6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H2AAQ96QV6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H2AAQ96QV6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H2AAQ96QV6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.36■□□□□ 0.69
HIST1H2AAQ96QV6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HIST1H2AAQ96QV6 AC021242.3-201ENST00000607598 1377 ntBASIC19.36■□□□□ 0.69
HIST1H2AAQ96QV6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HIST1H2AAQ96QV6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H2AAQ96QV6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
HIST1H2AAQ96QV6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H2AAQ96QV6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H2AAQ96QV6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H2AAQ96QV6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.36■□□□□ 0.69
HIST1H2AAQ96QV6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H2AAQ96QV6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H2AAQ96QV6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H2AAQ96QV6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 Z92544.1-202ENST00000571933 1220 ntBASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.35■□□□□ 0.69
HIST1H2AAQ96QV6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H2AAQ96QV6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HIST1H2AAQ96QV6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.34■□□□□ 0.69
HIST1H2AAQ96QV6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H2AAQ96QV6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H2AAQ96QV6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.34■□□□□ 0.69
HIST1H2AAQ96QV6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.34■□□□□ 0.69
HIST1H2AAQ96QV6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HIST1H2AAQ96QV6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H2AAQ96QV6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HIST1H2AAQ96QV6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H2AAQ96QV6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HIST1H2AAQ96QV6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H2AAQ96QV6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
HIST1H2AAQ96QV6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HIST1H2AAQ96QV6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.33■□□□□ 0.69
HIST1H2AAQ96QV6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.33■□□□□ 0.69
HIST1H2AAQ96QV6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIST1H2AAQ96QV6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIST1H2AAQ96QV6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H2AAQ96QV6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms