Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.78■■□□□ 1.4
CALR3Q96L12 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CALR3Q96L12 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CALR3Q96L12 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CALR3Q96L12 LINC00526-201ENST00000581067 1875 ntBASIC23.77■■□□□ 1.4
CALR3Q96L12 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CALR3Q96L12 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.77■■□□□ 1.4
CALR3Q96L12 GUSBP5-202ENST00000510805 1989 ntBASIC23.77■■□□□ 1.4
CALR3Q96L12 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CALR3Q96L12 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CALR3Q96L12 ECEL1P1-201ENST00000373592 1742 ntBASIC23.76■■□□□ 1.39
CALR3Q96L12 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CALR3Q96L12 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.76■■□□□ 1.39
CALR3Q96L12 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CALR3Q96L12 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.76■■□□□ 1.39
CALR3Q96L12 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CALR3Q96L12 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CALR3Q96L12 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CALR3Q96L12 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CALR3Q96L12 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CALR3Q96L12 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.75■■□□□ 1.39
CALR3Q96L12 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CALR3Q96L12 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.75■■□□□ 1.39
CALR3Q96L12 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CALR3Q96L12 AC127496.7-201ENST00000625110 1798 ntBASIC23.75■■□□□ 1.39
CALR3Q96L12 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CALR3Q96L12 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CALR3Q96L12 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CALR3Q96L12 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CALR3Q96L12 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.74■■□□□ 1.39
CALR3Q96L12 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CALR3Q96L12 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.74■■□□□ 1.39
CALR3Q96L12 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CALR3Q96L12 AC079630.1-202ENST00000618127 1840 ntBASIC23.74■■□□□ 1.39
CALR3Q96L12 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CALR3Q96L12 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CALR3Q96L12 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CALR3Q96L12 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CALR3Q96L12 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CALR3Q96L12 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
CALR3Q96L12 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CALR3Q96L12 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CALR3Q96L12 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CALR3Q96L12 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CALR3Q96L12 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.73■■□□□ 1.39
CALR3Q96L12 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.73■■□□□ 1.39
CALR3Q96L12 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CALR3Q96L12 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
CALR3Q96L12 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
CALR3Q96L12 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.72■■□□□ 1.39
CALR3Q96L12 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.72■■□□□ 1.39
CALR3Q96L12 ATP5G2P3-201ENST00000429083 425 ntBASIC23.72■■□□□ 1.39
CALR3Q96L12 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CALR3Q96L12 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CALR3Q96L12 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.72■■□□□ 1.39
CALR3Q96L12 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CALR3Q96L12 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CALR3Q96L12 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CALR3Q96L12 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.71■■□□□ 1.39
CALR3Q96L12 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CALR3Q96L12 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.71■■□□□ 1.39
CALR3Q96L12 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CALR3Q96L12 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.71■■□□□ 1.39
CALR3Q96L12 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CALR3Q96L12 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.71■■□□□ 1.39
CALR3Q96L12 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CALR3Q96L12 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CALR3Q96L12 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CALR3Q96L12 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CALR3Q96L12 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
CALR3Q96L12 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CALR3Q96L12 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CALR3Q96L12 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CALR3Q96L12 AC004987.1-201ENST00000428627 508 ntBASIC23.7■■□□□ 1.38
CALR3Q96L12 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.7■■□□□ 1.38
CALR3Q96L12 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
CALR3Q96L12 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.7■■□□□ 1.38
CALR3Q96L12 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CALR3Q96L12 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.7■■□□□ 1.38
CALR3Q96L12 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CALR3Q96L12 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CALR3Q96L12 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.69■■□□□ 1.38
CALR3Q96L12 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CALR3Q96L12 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.69■■□□□ 1.38
CALR3Q96L12 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CALR3Q96L12 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CALR3Q96L12 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CALR3Q96L12 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CALR3Q96L12 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.69■■□□□ 1.38
CALR3Q96L12 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CALR3Q96L12 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
CALR3Q96L12 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.69■■□□□ 1.38
CALR3Q96L12 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.69■■□□□ 1.38
CALR3Q96L12 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CALR3Q96L12 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CALR3Q96L12 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CALR3Q96L12 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.68■■□□□ 1.38
CALR3Q96L12 MIR4508-201ENST00000584178 70 ntBASIC23.68■■□□□ 1.38
CALR3Q96L12 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.68■■□□□ 1.38
CALR3Q96L12 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms