Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CHMP6Q96FZ7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CHMP6Q96FZ7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.58■■□□□ 1.21
CHMP6Q96FZ7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
CHMP6Q96FZ7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
CHMP6Q96FZ7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CHMP6Q96FZ7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CHMP6Q96FZ7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.58■■□□□ 1.21
CHMP6Q96FZ7 AL157400.5-201ENST00000507624 621 ntBASIC22.58■■□□□ 1.21
CHMP6Q96FZ7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CHMP6Q96FZ7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CHMP6Q96FZ7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.58■■□□□ 1.2
CHMP6Q96FZ7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CHMP6Q96FZ7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
CHMP6Q96FZ7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CHMP6Q96FZ7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 C11orf96-202ENST00000528572 1834 ntBASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 AL161729.1-201ENST00000604104 1402 ntBASIC22.57■■□□□ 1.2
CHMP6Q96FZ7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHMP6Q96FZ7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHMP6Q96FZ7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CHMP6Q96FZ7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHMP6Q96FZ7 MIR4449-201ENST00000578365 66 ntBASIC22.56■■□□□ 1.2
CHMP6Q96FZ7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.56■■□□□ 1.2
CHMP6Q96FZ7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.55■■□□□ 1.2
CHMP6Q96FZ7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.55■■□□□ 1.2
CHMP6Q96FZ7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CHMP6Q96FZ7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CHMP6Q96FZ7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHMP6Q96FZ7 MIR3960-201ENST00000583311 91 ntBASIC22.55■■□□□ 1.2
CHMP6Q96FZ7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHMP6Q96FZ7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHMP6Q96FZ7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.55■■□□□ 1.2
CHMP6Q96FZ7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHMP6Q96FZ7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.55■■□□□ 1.2
CHMP6Q96FZ7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CHMP6Q96FZ7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHMP6Q96FZ7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHMP6Q96FZ7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHMP6Q96FZ7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
CHMP6Q96FZ7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHMP6Q96FZ7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.54■■□□□ 1.2
CHMP6Q96FZ7 AC025884.2-201ENST00000553429 711 ntBASIC22.54■■□□□ 1.2
CHMP6Q96FZ7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.54■■□□□ 1.2
CHMP6Q96FZ7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CHMP6Q96FZ7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHMP6Q96FZ7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHMP6Q96FZ7 SMPD5-203ENST00000639008 1464 ntBASIC22.54■■□□□ 1.2
CHMP6Q96FZ7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 AC092053.2-201ENST00000640557 1818 ntBASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHMP6Q96FZ7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.52■■□□□ 1.2
CHMP6Q96FZ7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CHMP6Q96FZ7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.52■■□□□ 1.2
CHMP6Q96FZ7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.52■■□□□ 1.2
CHMP6Q96FZ7 FBXW4P1-201ENST00000426721 2239 ntBASIC22.52■■□□□ 1.2
CHMP6Q96FZ7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHMP6Q96FZ7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHMP6Q96FZ7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.52■■□□□ 1.2
CHMP6Q96FZ7 AC139530.1-201ENST00000575312 1977 ntBASIC22.52■■□□□ 1.2
CHMP6Q96FZ7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHMP6Q96FZ7 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.52■■□□□ 1.2
CHMP6Q96FZ7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHMP6Q96FZ7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHMP6Q96FZ7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHMP6Q96FZ7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.51■■□□□ 1.19
CHMP6Q96FZ7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms