Protein–RNA interactions for Protein: Q96EL3

MRPL53, 39S ribosomal protein L53, mitochondrial, humanhuman

Known RBP Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL53Q96EL3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL53Q96EL3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MRPL53Q96EL3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.88■□□□□ 0.29
MRPL53Q96EL3 AC004987.1-201ENST00000428627 508 ntBASIC16.88■□□□□ 0.29
MRPL53Q96EL3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.88■□□□□ 0.29
MRPL53Q96EL3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.88■□□□□ 0.29
MRPL53Q96EL3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.88■□□□□ 0.29
MRPL53Q96EL3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MRPL53Q96EL3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL53Q96EL3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MRPL53Q96EL3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL53Q96EL3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.87■□□□□ 0.29
MRPL53Q96EL3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL53Q96EL3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL53Q96EL3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL53Q96EL3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.87■□□□□ 0.29
MRPL53Q96EL3 TSPY13P-201ENST00000338964 914 ntBASIC16.87■□□□□ 0.29
MRPL53Q96EL3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL53Q96EL3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.87■□□□□ 0.29
MRPL53Q96EL3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.87■□□□□ 0.29
MRPL53Q96EL3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL53Q96EL3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
MRPL53Q96EL3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
MRPL53Q96EL3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
MRPL53Q96EL3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL53Q96EL3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL53Q96EL3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
MRPL53Q96EL3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPL53Q96EL3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
MRPL53Q96EL3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPL53Q96EL3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPL53Q96EL3 LINC00526-201ENST00000581067 1875 ntBASIC16.86■□□□□ 0.29
MRPL53Q96EL3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPL53Q96EL3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPL53Q96EL3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.86■□□□□ 0.29
MRPL53Q96EL3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
MRPL53Q96EL3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.86■□□□□ 0.29
MRPL53Q96EL3 MIR4508-201ENST00000584178 70 ntBASIC16.86■□□□□ 0.29
MRPL53Q96EL3 PVT1_1.1-201ENST00000615125 194 ntBASIC16.86■□□□□ 0.29
MRPL53Q96EL3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPL53Q96EL3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPL53Q96EL3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
MRPL53Q96EL3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
MRPL53Q96EL3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.86■□□□□ 0.29
MRPL53Q96EL3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPL53Q96EL3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.86■□□□□ 0.29
MRPL53Q96EL3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
MRPL53Q96EL3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL53Q96EL3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.85■□□□□ 0.29
MRPL53Q96EL3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.85■□□□□ 0.29
MRPL53Q96EL3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL53Q96EL3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL53Q96EL3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.85■□□□□ 0.29
MRPL53Q96EL3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL53Q96EL3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.85■□□□□ 0.29
MRPL53Q96EL3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.85■□□□□ 0.29
MRPL53Q96EL3 AC242852.2-201ENST00000615738 1807 ntBASIC16.84■□□□□ 0.29
MRPL53Q96EL3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL53Q96EL3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.84■□□□□ 0.29
MRPL53Q96EL3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL53Q96EL3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL53Q96EL3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.84■□□□□ 0.29
MRPL53Q96EL3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
MRPL53Q96EL3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.84■□□□□ 0.29
MRPL53Q96EL3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL53Q96EL3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.84■□□□□ 0.29
MRPL53Q96EL3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL53Q96EL3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL53Q96EL3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL53Q96EL3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL53Q96EL3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL53Q96EL3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.83■□□□□ 0.29
MRPL53Q96EL3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRPL53Q96EL3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRPL53Q96EL3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
MRPL53Q96EL3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.83■□□□□ 0.28
MRPL53Q96EL3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.83■□□□□ 0.28
MRPL53Q96EL3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
MRPL53Q96EL3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 AC010980.1-201ENST00000587192 1142 ntBASIC16.82■□□□□ 0.28
MRPL53Q96EL3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPL53Q96EL3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms