Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF183Q96D59 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RNF183Q96D59 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RNF183Q96D59 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RNF183Q96D59 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF183Q96D59 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RNF183Q96D59 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.54■□□□□ 0.24
RNF183Q96D59 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF183Q96D59 AC142381.3-201ENST00000568208 1670 ntBASIC16.54■□□□□ 0.24
RNF183Q96D59 UNC93B3-201ENST00000308076 687 ntBASIC16.54■□□□□ 0.24
RNF183Q96D59 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF183Q96D59 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF183Q96D59 DUX4L19-201ENST00000557448 1267 ntBASIC16.54■□□□□ 0.24
RNF183Q96D59 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RNF183Q96D59 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF183Q96D59 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF183Q96D59 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF183Q96D59 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF183Q96D59 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF183Q96D59 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF183Q96D59 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF183Q96D59 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF183Q96D59 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RNF183Q96D59 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF183Q96D59 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF183Q96D59 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF183Q96D59 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF183Q96D59 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF183Q96D59 PBX2P1-201ENST00000493219 1291 ntBASIC16.53■□□□□ 0.24
RNF183Q96D59 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF183Q96D59 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF183Q96D59 AC106739.1-201ENST00000617035 715 ntBASIC16.53■□□□□ 0.24
RNF183Q96D59 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF183Q96D59 AL024507.2-201ENST00000606070 2574 ntBASIC16.52■□□□□ 0.24
RNF183Q96D59 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF183Q96D59 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF183Q96D59 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
RNF183Q96D59 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF183Q96D59 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF183Q96D59 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF183Q96D59 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF183Q96D59 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
RNF183Q96D59 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RNF183Q96D59 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF183Q96D59 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF183Q96D59 AC005837.3-201ENST00000612163 286 ntBASIC16.52■□□□□ 0.24
RNF183Q96D59 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF183Q96D59 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF183Q96D59 AC009102.2-201ENST00000606772 1639 ntBASIC16.52■□□□□ 0.23
RNF183Q96D59 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF183Q96D59 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF183Q96D59 ALDH1A3-203ENST00000557963 1670 ntBASIC16.51■□□□□ 0.23
RNF183Q96D59 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF183Q96D59 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF183Q96D59 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF183Q96D59 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF183Q96D59 AL136162.1-201ENST00000607711 1078 ntBASIC16.51■□□□□ 0.23
RNF183Q96D59 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF183Q96D59 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF183Q96D59 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF183Q96D59 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RNF183Q96D59 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF183Q96D59 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF183Q96D59 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF183Q96D59 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF183Q96D59 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF183Q96D59 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF183Q96D59 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF183Q96D59 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF183Q96D59 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF183Q96D59 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF183Q96D59 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
RNF183Q96D59 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF183Q96D59 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF183Q96D59 AC135279.3-201ENST00000610945 1311 ntBASIC16.49■□□□□ 0.23
RNF183Q96D59 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF183Q96D59 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF183Q96D59 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF183Q96D59 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF183Q96D59 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF183Q96D59 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF183Q96D59 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF183Q96D59 AC138932.3-201ENST00000567634 1902 ntBASIC16.49■□□□□ 0.23
RNF183Q96D59 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF183Q96D59 SYT6-210ENST00000641643 1587 ntBASIC16.48■□□□□ 0.23
RNF183Q96D59 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RNF183Q96D59 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.48■□□□□ 0.23
RNF183Q96D59 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF183Q96D59 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RNF183Q96D59 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF183Q96D59 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF183Q96D59 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF183Q96D59 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF183Q96D59 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF183Q96D59 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF183Q96D59 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF183Q96D59 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.47■□□□□ 0.23
RNF183Q96D59 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF183Q96D59 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF183Q96D59 C17orf82-201ENST00000623772 1530 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms