Protein–RNA interactions for Protein: Q92729

PTPRU, Receptor-type tyrosine-protein phosphatase U, humanhuman

Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRUQ92729 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC31.9■■■□□ 2.7
PTPRUQ92729 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PTPRUQ92729 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PTPRUQ92729 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC31.89■■■□□ 2.7
PTPRUQ92729 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC31.89■■■□□ 2.7
PTPRUQ92729 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
PTPRUQ92729 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.69
PTPRUQ92729 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC31.88■■■□□ 2.69
PTPRUQ92729 AC133637.1-201ENST00000624115 1537 ntBASIC31.88■■■□□ 2.69
PTPRUQ92729 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PTPRUQ92729 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PTPRUQ92729 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC31.88■■■□□ 2.69
PTPRUQ92729 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PTPRUQ92729 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PTPRUQ92729 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
PTPRUQ92729 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
PTPRUQ92729 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
PTPRUQ92729 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PTPRUQ92729 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
PTPRUQ92729 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC31.87■■■□□ 2.69
PTPRUQ92729 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
PTPRUQ92729 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC31.87■■■□□ 2.69
PTPRUQ92729 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PTPRUQ92729 AL161729.1-201ENST00000604104 1402 ntBASIC31.86■■■□□ 2.69
PTPRUQ92729 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC31.86■■■□□ 2.69
PTPRUQ92729 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
PTPRUQ92729 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC31.86■■■□□ 2.69
PTPRUQ92729 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
PTPRUQ92729 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
PTPRUQ92729 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PTPRUQ92729 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PTPRUQ92729 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
PTPRUQ92729 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC31.85■■■□□ 2.69
PTPRUQ92729 LINC02228-203ENST00000641970 1355 ntBASIC31.85■■■□□ 2.69
PTPRUQ92729 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
PTPRUQ92729 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PTPRUQ92729 ALDH1A3-203ENST00000557963 1670 ntBASIC31.85■■■□□ 2.69
PTPRUQ92729 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
PTPRUQ92729 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
PTPRUQ92729 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
PTPRUQ92729 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PTPRUQ92729 OR2I1P-207ENST00000453522 948 ntBASIC31.84■■■□□ 2.69
PTPRUQ92729 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
PTPRUQ92729 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PTPRUQ92729 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PTPRUQ92729 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
PTPRUQ92729 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
PTPRUQ92729 AC006015.1-201ENST00000429970 570 ntBASIC31.83■■■□□ 2.69
PTPRUQ92729 AL499627.2-201ENST00000606283 725 ntBASIC31.83■■■□□ 2.69
PTPRUQ92729 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PTPRUQ92729 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PTPRUQ92729 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
PTPRUQ92729 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC31.83■■■□□ 2.69
PTPRUQ92729 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
PTPRUQ92729 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PTPRUQ92729 HLA-L-211ENST00000482052 1765 ntBASIC31.83■■■□□ 2.69
PTPRUQ92729 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PTPRUQ92729 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PTPRUQ92729 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC31.83■■■□□ 2.69
PTPRUQ92729 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC31.83■■■□□ 2.69
PTPRUQ92729 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PTPRUQ92729 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC31.83■■■□□ 2.69
PTPRUQ92729 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PTPRUQ92729 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC31.83■■■□□ 2.69
PTPRUQ92729 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
PTPRUQ92729 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC31.82■■■□□ 2.68
PTPRUQ92729 EI24-204ENST00000527235 1625 ntTSL 5 BASIC31.82■■■□□ 2.68
PTPRUQ92729 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC31.82■■■□□ 2.68
PTPRUQ92729 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PTPRUQ92729 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PTPRUQ92729 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PTPRUQ92729 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
PTPRUQ92729 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
PTPRUQ92729 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC31.82■■■□□ 2.68
PTPRUQ92729 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC31.82■■■□□ 2.68
PTPRUQ92729 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
PTPRUQ92729 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC31.82■■■□□ 2.68
PTPRUQ92729 TK2-208ENST00000545043 1120 ntTSL 2 BASIC31.82■■■□□ 2.68
PTPRUQ92729 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
PTPRUQ92729 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
PTPRUQ92729 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC31.81■■■□□ 2.68
PTPRUQ92729 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC31.81■■■□□ 2.68
PTPRUQ92729 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC31.81■■■□□ 2.68
PTPRUQ92729 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
PTPRUQ92729 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC31.81■■■□□ 2.68
PTPRUQ92729 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC31.81■■■□□ 2.68
PTPRUQ92729 DUSP8P4-201ENST00000399538 1761 ntBASIC31.81■■■□□ 2.68
PTPRUQ92729 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC31.81■■■□□ 2.68
PTPRUQ92729 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.8■■■□□ 2.68
PTPRUQ92729 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PTPRUQ92729 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PTPRUQ92729 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC31.8■■■□□ 2.68
PTPRUQ92729 CEBPA-AS1-201ENST00000592982 2198 ntBASIC31.8■■■□□ 2.68
PTPRUQ92729 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
PTPRUQ92729 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
PTPRUQ92729 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC31.8■■■□□ 2.68
PTPRUQ92729 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC31.8■■■□□ 2.68
PTPRUQ92729 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
PTPRUQ92729 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC31.8■■■□□ 2.68
PTPRUQ92729 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC31.8■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms