Protein–RNA interactions for Protein: Q92485

SMPDL3B, Acid sphingomyelinase-like phosphodiesterase 3b, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3BQ92485 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMPDL3BQ92485 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMPDL3BQ92485 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPDL3BQ92485 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPDL3BQ92485 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.65■□□□□ 0.9
SMPDL3BQ92485 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SMPDL3BQ92485 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
SMPDL3BQ92485 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.65■□□□□ 0.9
SMPDL3BQ92485 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMPDL3BQ92485 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPDL3BQ92485 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.65■□□□□ 0.9
SMPDL3BQ92485 MIR6722-201ENST00000617286 78 ntBASIC20.65■□□□□ 0.9
SMPDL3BQ92485 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SMPDL3BQ92485 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPDL3BQ92485 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SMPDL3BQ92485 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.64■□□□□ 0.9
SMPDL3BQ92485 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.64■□□□□ 0.89
SMPDL3BQ92485 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.64■□□□□ 0.89
SMPDL3BQ92485 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMPDL3BQ92485 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMPDL3BQ92485 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.64■□□□□ 0.89
SMPDL3BQ92485 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPDL3BQ92485 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.64■□□□□ 0.89
SMPDL3BQ92485 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.64■□□□□ 0.89
SMPDL3BQ92485 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPDL3BQ92485 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SMPDL3BQ92485 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPDL3BQ92485 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.64■□□□□ 0.89
SMPDL3BQ92485 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPDL3BQ92485 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMPDL3BQ92485 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPDL3BQ92485 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPDL3BQ92485 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPDL3BQ92485 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPDL3BQ92485 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMPDL3BQ92485 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.63■□□□□ 0.89
SMPDL3BQ92485 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPDL3BQ92485 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.63■□□□□ 0.89
SMPDL3BQ92485 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.62■□□□□ 0.89
SMPDL3BQ92485 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SMPDL3BQ92485 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.62■□□□□ 0.89
SMPDL3BQ92485 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.62■□□□□ 0.89
SMPDL3BQ92485 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.62■□□□□ 0.89
SMPDL3BQ92485 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMPDL3BQ92485 C9orf163-202ENST00000624034 2573 ntBASIC20.62■□□□□ 0.89
SMPDL3BQ92485 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMPDL3BQ92485 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMPDL3BQ92485 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMPDL3BQ92485 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SMPDL3BQ92485 AL161729.1-201ENST00000604104 1402 ntBASIC20.61■□□□□ 0.89
SMPDL3BQ92485 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMPDL3BQ92485 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.61■□□□□ 0.89
SMPDL3BQ92485 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMPDL3BQ92485 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMPDL3BQ92485 AL117332.1-201ENST00000622628 974 ntBASIC20.61■□□□□ 0.89
SMPDL3BQ92485 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMPDL3BQ92485 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMPDL3BQ92485 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMPDL3BQ92485 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMPDL3BQ92485 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.61■□□□□ 0.89
SMPDL3BQ92485 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMPDL3BQ92485 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMPDL3BQ92485 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SMPDL3BQ92485 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMPDL3BQ92485 AC005703.6-201ENST00000623265 1329 ntBASIC20.6■□□□□ 0.89
SMPDL3BQ92485 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMPDL3BQ92485 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.6■□□□□ 0.89
SMPDL3BQ92485 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SMPDL3BQ92485 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.6■□□□□ 0.89
SMPDL3BQ92485 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMPDL3BQ92485 AL356740.2-201ENST00000601559 647 ntBASIC20.6■□□□□ 0.89
SMPDL3BQ92485 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.6■□□□□ 0.89
SMPDL3BQ92485 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMPDL3BQ92485 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMPDL3BQ92485 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SMPDL3BQ92485 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SMPDL3BQ92485 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SMPDL3BQ92485 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMPDL3BQ92485 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.59■□□□□ 0.89
SMPDL3BQ92485 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMPDL3BQ92485 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMPDL3BQ92485 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.59■□□□□ 0.89
SMPDL3BQ92485 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMPDL3BQ92485 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.59■□□□□ 0.89
SMPDL3BQ92485 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.59■□□□□ 0.89
SMPDL3BQ92485 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.59■□□□□ 0.89
SMPDL3BQ92485 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMPDL3BQ92485 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.59■□□□□ 0.89
SMPDL3BQ92485 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMPDL3BQ92485 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMPDL3BQ92485 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMPDL3BQ92485 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMPDL3BQ92485 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.58■□□□□ 0.88
SMPDL3BQ92485 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SMPDL3BQ92485 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SMPDL3BQ92485 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SMPDL3BQ92485 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMPDL3BQ92485 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SMPDL3BQ92485 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMPDL3BQ92485 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms