Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB40AQ8WXH6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB40AQ8WXH6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40AQ8WXH6 AL161729.1-201ENST00000604104 1402 ntBASIC19.68■□□□□ 0.74
RAB40AQ8WXH6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40AQ8WXH6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40AQ8WXH6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.68■□□□□ 0.74
RAB40AQ8WXH6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40AQ8WXH6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RAB40AQ8WXH6 AL031848.2-201ENST00000607670 837 ntBASIC19.68■□□□□ 0.74
RAB40AQ8WXH6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB40AQ8WXH6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40AQ8WXH6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40AQ8WXH6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40AQ8WXH6 PKD1P6-201ENST00000343738 4769 ntBASIC19.68■□□□□ 0.74
RAB40AQ8WXH6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RAB40AQ8WXH6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RAB40AQ8WXH6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40AQ8WXH6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB40AQ8WXH6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB40AQ8WXH6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB40AQ8WXH6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB40AQ8WXH6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB40AQ8WXH6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB40AQ8WXH6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB40AQ8WXH6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.66■□□□□ 0.74
RAB40AQ8WXH6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB40AQ8WXH6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB40AQ8WXH6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40AQ8WXH6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40AQ8WXH6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40AQ8WXH6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40AQ8WXH6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40AQ8WXH6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RAB40AQ8WXH6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.65■□□□□ 0.74
RAB40AQ8WXH6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40AQ8WXH6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RAB40AQ8WXH6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40AQ8WXH6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40AQ8WXH6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB40AQ8WXH6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
RAB40AQ8WXH6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.64■□□□□ 0.74
RAB40AQ8WXH6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAB40AQ8WXH6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40AQ8WXH6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40AQ8WXH6 AC009299.2-201ENST00000482477 511 ntBASIC19.64■□□□□ 0.73
RAB40AQ8WXH6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40AQ8WXH6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40AQ8WXH6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB40AQ8WXH6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.64■□□□□ 0.73
RAB40AQ8WXH6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40AQ8WXH6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40AQ8WXH6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RAB40AQ8WXH6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
RAB40AQ8WXH6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40AQ8WXH6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40AQ8WXH6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
RAB40AQ8WXH6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB40AQ8WXH6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB40AQ8WXH6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB40AQ8WXH6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB40AQ8WXH6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.63■□□□□ 0.73
RAB40AQ8WXH6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.63■□□□□ 0.73
RAB40AQ8WXH6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB40AQ8WXH6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RAB40AQ8WXH6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RAB40AQ8WXH6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB40AQ8WXH6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB40AQ8WXH6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB40AQ8WXH6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RAB40AQ8WXH6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB40AQ8WXH6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RAB40AQ8WXH6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB40AQ8WXH6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RAB40AQ8WXH6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB40AQ8WXH6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB40AQ8WXH6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40AQ8WXH6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40AQ8WXH6 AL592295.1-201ENST00000400984 884 ntBASIC19.61■□□□□ 0.73
RAB40AQ8WXH6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms