Protein–RNA interactions for Protein: Q8TDX6

CSGALNACT1, Chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1Q8TDX6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CSGALNACT1Q8TDX6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CSGALNACT1Q8TDX6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CSGALNACT1Q8TDX6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.19■■□□□ 1.3
CSGALNACT1Q8TDX6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSGALNACT1Q8TDX6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSGALNACT1Q8TDX6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSGALNACT1Q8TDX6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSGALNACT1Q8TDX6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.19■■□□□ 1.3
CSGALNACT1Q8TDX6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSGALNACT1Q8TDX6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CSGALNACT1Q8TDX6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.19■■□□□ 1.3
CSGALNACT1Q8TDX6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.19■■□□□ 1.3
CSGALNACT1Q8TDX6 YBX1P1-201ENST00000445822 960 ntBASIC23.19■■□□□ 1.3
CSGALNACT1Q8TDX6 SLC47A1P1-202ENST00000449666 945 ntBASIC23.19■■□□□ 1.3
CSGALNACT1Q8TDX6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.19■■□□□ 1.3
CSGALNACT1Q8TDX6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.19■■□□□ 1.3
CSGALNACT1Q8TDX6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSGALNACT1Q8TDX6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSGALNACT1Q8TDX6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSGALNACT1Q8TDX6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.18■■□□□ 1.3
CSGALNACT1Q8TDX6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.18■■□□□ 1.3
CSGALNACT1Q8TDX6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSGALNACT1Q8TDX6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.18■■□□□ 1.3
CSGALNACT1Q8TDX6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSGALNACT1Q8TDX6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSGALNACT1Q8TDX6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSGALNACT1Q8TDX6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.18■■□□□ 1.3
CSGALNACT1Q8TDX6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.17■■□□□ 1.3
CSGALNACT1Q8TDX6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSGALNACT1Q8TDX6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.17■■□□□ 1.3
CSGALNACT1Q8TDX6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.17■■□□□ 1.3
CSGALNACT1Q8TDX6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.17■■□□□ 1.3
CSGALNACT1Q8TDX6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.17■■□□□ 1.3
CSGALNACT1Q8TDX6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CSGALNACT1Q8TDX6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSGALNACT1Q8TDX6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CSGALNACT1Q8TDX6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.17■■□□□ 1.3
CSGALNACT1Q8TDX6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.17■■□□□ 1.3
CSGALNACT1Q8TDX6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.17■■□□□ 1.3
CSGALNACT1Q8TDX6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
CSGALNACT1Q8TDX6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSGALNACT1Q8TDX6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.16■■□□□ 1.3
CSGALNACT1Q8TDX6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CSGALNACT1Q8TDX6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.16■■□□□ 1.3
CSGALNACT1Q8TDX6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSGALNACT1Q8TDX6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.16■■□□□ 1.3
CSGALNACT1Q8TDX6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.16■■□□□ 1.3
CSGALNACT1Q8TDX6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.16■■□□□ 1.3
CSGALNACT1Q8TDX6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.16■■□□□ 1.3
CSGALNACT1Q8TDX6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CSGALNACT1Q8TDX6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CSGALNACT1Q8TDX6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CSGALNACT1Q8TDX6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CSGALNACT1Q8TDX6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CSGALNACT1Q8TDX6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.15■■□□□ 1.3
CSGALNACT1Q8TDX6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.15■■□□□ 1.3
CSGALNACT1Q8TDX6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CSGALNACT1Q8TDX6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CSGALNACT1Q8TDX6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.15■■□□□ 1.3
CSGALNACT1Q8TDX6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.15■■□□□ 1.3
CSGALNACT1Q8TDX6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CSGALNACT1Q8TDX6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CSGALNACT1Q8TDX6 AL358852.1-201ENST00000623174 1268 ntBASIC23.15■■□□□ 1.3
CSGALNACT1Q8TDX6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CSGALNACT1Q8TDX6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CSGALNACT1Q8TDX6 AC135731.1-201ENST00000569415 2548 ntBASIC23.15■■□□□ 1.3
CSGALNACT1Q8TDX6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CSGALNACT1Q8TDX6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.14■■□□□ 1.29
CSGALNACT1Q8TDX6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
CSGALNACT1Q8TDX6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.14■■□□□ 1.29
CSGALNACT1Q8TDX6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.14■■□□□ 1.29
CSGALNACT1Q8TDX6 AL137784.2-201ENST00000607332 1000 ntBASIC23.14■■□□□ 1.29
CSGALNACT1Q8TDX6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CSGALNACT1Q8TDX6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.13■■□□□ 1.29
CSGALNACT1Q8TDX6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CSGALNACT1Q8TDX6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.13■■□□□ 1.29
CSGALNACT1Q8TDX6 AC022517.1-201ENST00000592429 346 ntBASIC23.13■■□□□ 1.29
CSGALNACT1Q8TDX6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.13■■□□□ 1.29
CSGALNACT1Q8TDX6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.13■■□□□ 1.29
CSGALNACT1Q8TDX6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.13■■□□□ 1.29
CSGALNACT1Q8TDX6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CSGALNACT1Q8TDX6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.12■■□□□ 1.29
CSGALNACT1Q8TDX6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CSGALNACT1Q8TDX6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CSGALNACT1Q8TDX6 KRT18P5-201ENST00000436075 1291 ntBASIC23.12■■□□□ 1.29
CSGALNACT1Q8TDX6 IGHV3-19-201ENST00000521488 291 ntBASIC23.12■■□□□ 1.29
CSGALNACT1Q8TDX6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.12■■□□□ 1.29
CSGALNACT1Q8TDX6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.12■■□□□ 1.29
CSGALNACT1Q8TDX6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.12■■□□□ 1.29
CSGALNACT1Q8TDX6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CSGALNACT1Q8TDX6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.12■■□□□ 1.29
CSGALNACT1Q8TDX6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CSGALNACT1Q8TDX6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CSGALNACT1Q8TDX6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CSGALNACT1Q8TDX6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.11■■□□□ 1.29
CSGALNACT1Q8TDX6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CSGALNACT1Q8TDX6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CSGALNACT1Q8TDX6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.11■■□□□ 1.29
CSGALNACT1Q8TDX6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms