Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LINC01560Q8TB33 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC01560Q8TB33 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.56■□□□□ 0.72
LINC01560Q8TB33 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
LINC01560Q8TB33 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.56■□□□□ 0.72
LINC01560Q8TB33 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LINC01560Q8TB33 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.56■□□□□ 0.72
LINC01560Q8TB33 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC01560Q8TB33 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
LINC01560Q8TB33 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC01560Q8TB33 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC01560Q8TB33 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LINC01560Q8TB33 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.55■□□□□ 0.72
LINC01560Q8TB33 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LINC01560Q8TB33 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.55■□□□□ 0.72
LINC01560Q8TB33 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LINC01560Q8TB33 AC034268.1-201ENST00000441047 882 ntBASIC19.55■□□□□ 0.72
LINC01560Q8TB33 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LINC01560Q8TB33 AP003733.4-201ENST00000623785 1697 ntBASIC19.55■□□□□ 0.72
LINC01560Q8TB33 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LINC01560Q8TB33 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01560Q8TB33 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.54■□□□□ 0.72
LINC01560Q8TB33 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.54■□□□□ 0.72
LINC01560Q8TB33 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01560Q8TB33 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01560Q8TB33 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.54■□□□□ 0.72
LINC01560Q8TB33 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.54■□□□□ 0.72
LINC01560Q8TB33 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LINC01560Q8TB33 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01560Q8TB33 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01560Q8TB33 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LINC01560Q8TB33 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01560Q8TB33 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.53■□□□□ 0.72
LINC01560Q8TB33 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01560Q8TB33 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01560Q8TB33 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01560Q8TB33 AC133637.1-201ENST00000624115 1537 ntBASIC19.53■□□□□ 0.72
LINC01560Q8TB33 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01560Q8TB33 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01560Q8TB33 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01560Q8TB33 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.53■□□□□ 0.72
LINC01560Q8TB33 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.53■□□□□ 0.72
LINC01560Q8TB33 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.53■□□□□ 0.72
LINC01560Q8TB33 AL031602.1-201ENST00000633169 911 ntBASIC19.53■□□□□ 0.72
LINC01560Q8TB33 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01560Q8TB33 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01560Q8TB33 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC01560Q8TB33 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01560Q8TB33 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.52■□□□□ 0.72
LINC01560Q8TB33 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01560Q8TB33 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01560Q8TB33 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01560Q8TB33 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.52■□□□□ 0.72
LINC01560Q8TB33 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LINC01560Q8TB33 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01560Q8TB33 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.52■□□□□ 0.72
LINC01560Q8TB33 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.52■□□□□ 0.72
LINC01560Q8TB33 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01560Q8TB33 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01560Q8TB33 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC01560Q8TB33 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LINC01560Q8TB33 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LINC01560Q8TB33 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 YBX1P1-201ENST00000445822 960 ntBASIC19.51■□□□□ 0.71
LINC01560Q8TB33 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.51■□□□□ 0.71
LINC01560Q8TB33 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.5■□□□□ 0.71
LINC01560Q8TB33 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.5■□□□□ 0.71
LINC01560Q8TB33 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01560Q8TB33 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.5■□□□□ 0.71
LINC01560Q8TB33 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01560Q8TB33 IKBKGP1-201ENST00000612193 1073 ntBASIC19.5■□□□□ 0.71
LINC01560Q8TB33 MIR6084-201ENST00000622012 110 ntBASIC19.5■□□□□ 0.71
LINC01560Q8TB33 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01560Q8TB33 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC01560Q8TB33 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01560Q8TB33 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01560Q8TB33 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01560Q8TB33 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01560Q8TB33 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01560Q8TB33 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01560Q8TB33 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01560Q8TB33 IGHV3-19-201ENST00000521488 291 ntBASIC19.49■□□□□ 0.71
LINC01560Q8TB33 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms