Protein–RNA interactions for Protein: Q8N7A1

KLHDC1, Kelch domain-containing protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC1Q8N7A1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC1Q8N7A1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
KLHDC1Q8N7A1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC1Q8N7A1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC1Q8N7A1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
KLHDC1Q8N7A1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.05■□□□□ 0.48
KLHDC1Q8N7A1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
KLHDC1Q8N7A1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC1Q8N7A1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.05■□□□□ 0.48
KLHDC1Q8N7A1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.05■□□□□ 0.48
KLHDC1Q8N7A1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KLHDC1Q8N7A1 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 AL136162.1-201ENST00000607711 1078 ntBASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.04■□□□□ 0.48
KLHDC1Q8N7A1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC1Q8N7A1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC1Q8N7A1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC1Q8N7A1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
KLHDC1Q8N7A1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.03■□□□□ 0.48
KLHDC1Q8N7A1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC1Q8N7A1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC1Q8N7A1 AC142381.2-201ENST00000566120 298 ntBASIC18.03■□□□□ 0.48
KLHDC1Q8N7A1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC1Q8N7A1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC1Q8N7A1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
KLHDC1Q8N7A1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC1Q8N7A1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
KLHDC1Q8N7A1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC1Q8N7A1 AC131274.2-201ENST00000580697 1507 ntBASIC18.03■□□□□ 0.48
KLHDC1Q8N7A1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KLHDC1Q8N7A1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.02■□□□□ 0.48
KLHDC1Q8N7A1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHDC1Q8N7A1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KLHDC1Q8N7A1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHDC1Q8N7A1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KLHDC1Q8N7A1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.02■□□□□ 0.48
KLHDC1Q8N7A1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KLHDC1Q8N7A1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
KLHDC1Q8N7A1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
KLHDC1Q8N7A1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.02■□□□□ 0.47
KLHDC1Q8N7A1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KLHDC1Q8N7A1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KLHDC1Q8N7A1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC1Q8N7A1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
KLHDC1Q8N7A1 AC135279.3-201ENST00000610945 1311 ntBASIC18.01■□□□□ 0.47
KLHDC1Q8N7A1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC1Q8N7A1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC1Q8N7A1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.01■□□□□ 0.47
KLHDC1Q8N7A1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
KLHDC1Q8N7A1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC1Q8N7A1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC1Q8N7A1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
KLHDC1Q8N7A1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC1Q8N7A1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC1Q8N7A1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC1Q8N7A1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC1Q8N7A1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18■□□□□ 0.47
KLHDC1Q8N7A1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC1Q8N7A1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC1Q8N7A1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC1Q8N7A1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18■□□□□ 0.47
KLHDC1Q8N7A1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18■□□□□ 0.47
KLHDC1Q8N7A1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
KLHDC1Q8N7A1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18■□□□□ 0.47
KLHDC1Q8N7A1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC1Q8N7A1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC1Q8N7A1 AL022069.1-201ENST00000568025 1636 ntBASIC18■□□□□ 0.47
KLHDC1Q8N7A1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC1Q8N7A1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC1Q8N7A1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC1Q8N7A1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
KLHDC1Q8N7A1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC1Q8N7A1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
KLHDC1Q8N7A1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC1Q8N7A1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC1Q8N7A1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC1Q8N7A1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
KLHDC1Q8N7A1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC1Q8N7A1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC1Q8N7A1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC1Q8N7A1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms