Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.11■■□□□ 1.29
SIX5Q8N196 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SIX5Q8N196 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SIX5Q8N196 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.11■■□□□ 1.29
SIX5Q8N196 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SIX5Q8N196 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SIX5Q8N196 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SIX5Q8N196 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SIX5Q8N196 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.1■■□□□ 1.29
SIX5Q8N196 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SIX5Q8N196 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.1■■□□□ 1.29
SIX5Q8N196 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.1■■□□□ 1.29
SIX5Q8N196 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SIX5Q8N196 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SIX5Q8N196 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.09■■□□□ 1.29
SIX5Q8N196 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.09■■□□□ 1.29
SIX5Q8N196 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SIX5Q8N196 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.09■■□□□ 1.29
SIX5Q8N196 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SIX5Q8N196 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SIX5Q8N196 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SIX5Q8N196 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.09■■□□□ 1.29
SIX5Q8N196 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.09■■□□□ 1.29
SIX5Q8N196 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.09■■□□□ 1.29
SIX5Q8N196 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SIX5Q8N196 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SIX5Q8N196 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
SIX5Q8N196 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.08■■□□□ 1.29
SIX5Q8N196 AC141586.4-201ENST00000624558 1573 ntBASIC23.08■■□□□ 1.29
SIX5Q8N196 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.08■■□□□ 1.28
SIX5Q8N196 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SIX5Q8N196 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SIX5Q8N196 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SIX5Q8N196 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.07■■□□□ 1.28
SIX5Q8N196 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SIX5Q8N196 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SIX5Q8N196 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
SIX5Q8N196 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
SIX5Q8N196 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
SIX5Q8N196 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SIX5Q8N196 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
SIX5Q8N196 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SIX5Q8N196 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SIX5Q8N196 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.06■■□□□ 1.28
SIX5Q8N196 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.06■■□□□ 1.28
SIX5Q8N196 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SIX5Q8N196 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SIX5Q8N196 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.05■■□□□ 1.28
SIX5Q8N196 SLC6A10P-202ENST00000431994 2058 ntBASIC23.05■■□□□ 1.28
SIX5Q8N196 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SIX5Q8N196 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.05■■□□□ 1.28
SIX5Q8N196 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.05■■□□□ 1.28
SIX5Q8N196 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SIX5Q8N196 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SIX5Q8N196 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.05■■□□□ 1.28
SIX5Q8N196 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.05■■□□□ 1.28
SIX5Q8N196 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SIX5Q8N196 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.04■■□□□ 1.28
SIX5Q8N196 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.04■■□□□ 1.28
SIX5Q8N196 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.04■■□□□ 1.28
SIX5Q8N196 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SIX5Q8N196 MIR6089-201ENST00000616698 64 ntBASIC23.04■■□□□ 1.28
SIX5Q8N196 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SIX5Q8N196 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.04■■□□□ 1.28
SIX5Q8N196 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SIX5Q8N196 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SIX5Q8N196 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SIX5Q8N196 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SIX5Q8N196 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.03■■□□□ 1.28
SIX5Q8N196 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SIX5Q8N196 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SIX5Q8N196 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.03■■□□□ 1.28
SIX5Q8N196 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SIX5Q8N196 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SIX5Q8N196 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SIX5Q8N196 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SIX5Q8N196 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SIX5Q8N196 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SIX5Q8N196 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SIX5Q8N196 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.02■■□□□ 1.28
SIX5Q8N196 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SIX5Q8N196 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SIX5Q8N196 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SIX5Q8N196 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.02■■□□□ 1.28
SIX5Q8N196 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.02■■□□□ 1.28
SIX5Q8N196 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SIX5Q8N196 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.02■■□□□ 1.28
SIX5Q8N196 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.02■■□□□ 1.28
SIX5Q8N196 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.02■■□□□ 1.28
SIX5Q8N196 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SIX5Q8N196 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
SIX5Q8N196 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
SIX5Q8N196 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SIX5Q8N196 AC133637.1-201ENST00000624115 1537 ntBASIC23.02■■□□□ 1.28
SIX5Q8N196 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.01■■□□□ 1.27
SIX5Q8N196 ABHD17AP1-201ENST00000358206 933 ntBASIC23.01■■□□□ 1.27
SIX5Q8N196 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SIX5Q8N196 AC016769.1-201ENST00000409132 1010 ntBASIC23.01■■□□□ 1.27
SIX5Q8N196 AC006015.1-201ENST00000429970 570 ntBASIC23.01■■□□□ 1.27
SIX5Q8N196 RAP2CP1-201ENST00000605103 478 ntBASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms