Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CROCCP3Q8IVE0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CROCCP3Q8IVE0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CROCCP3Q8IVE0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CROCCP3Q8IVE0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CROCCP3Q8IVE0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.34■□□□□ 0.85
CROCCP3Q8IVE0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CROCCP3Q8IVE0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CROCCP3Q8IVE0 AL391422.3-201ENST00000603791 2761 ntBASIC20.34■□□□□ 0.85
CROCCP3Q8IVE0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CROCCP3Q8IVE0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CROCCP3Q8IVE0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.34■□□□□ 0.85
CROCCP3Q8IVE0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CROCCP3Q8IVE0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CROCCP3Q8IVE0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CROCCP3Q8IVE0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.34■□□□□ 0.85
CROCCP3Q8IVE0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CROCCP3Q8IVE0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CROCCP3Q8IVE0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CROCCP3Q8IVE0 ESRRAP2-201ENST00000418437 1549 ntBASIC20.33■□□□□ 0.85
CROCCP3Q8IVE0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CROCCP3Q8IVE0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.33■□□□□ 0.85
CROCCP3Q8IVE0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.33■□□□□ 0.85
CROCCP3Q8IVE0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CROCCP3Q8IVE0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
CROCCP3Q8IVE0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CROCCP3Q8IVE0 C11orf96-202ENST00000528572 1834 ntBASIC20.33■□□□□ 0.85
CROCCP3Q8IVE0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CROCCP3Q8IVE0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CROCCP3Q8IVE0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.33■□□□□ 0.84
CROCCP3Q8IVE0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CROCCP3Q8IVE0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CROCCP3Q8IVE0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CROCCP3Q8IVE0 AF106564.1-201ENST00000607058 2553 ntBASIC20.33■□□□□ 0.84
CROCCP3Q8IVE0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CROCCP3Q8IVE0 AC026310.3-201ENST00000625186 2373 ntBASIC20.32■□□□□ 0.84
CROCCP3Q8IVE0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CROCCP3Q8IVE0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CROCCP3Q8IVE0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CROCCP3Q8IVE0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CROCCP3Q8IVE0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CROCCP3Q8IVE0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CROCCP3Q8IVE0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.31■□□□□ 0.84
CROCCP3Q8IVE0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CROCCP3Q8IVE0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CROCCP3Q8IVE0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CROCCP3Q8IVE0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CROCCP3Q8IVE0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.31■□□□□ 0.84
CROCCP3Q8IVE0 DUX4L29-201ENST00000425409 679 ntBASIC20.31■□□□□ 0.84
CROCCP3Q8IVE0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.31■□□□□ 0.84
CROCCP3Q8IVE0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CROCCP3Q8IVE0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.31■□□□□ 0.84
CROCCP3Q8IVE0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CROCCP3Q8IVE0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CROCCP3Q8IVE0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.3■□□□□ 0.84
CROCCP3Q8IVE0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CROCCP3Q8IVE0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP3Q8IVE0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP3Q8IVE0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP3Q8IVE0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP3Q8IVE0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP3Q8IVE0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP3Q8IVE0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP3Q8IVE0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP3Q8IVE0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP3Q8IVE0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CROCCP3Q8IVE0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CROCCP3Q8IVE0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.3■□□□□ 0.84
CROCCP3Q8IVE0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CROCCP3Q8IVE0 HLA-L-211ENST00000482052 1765 ntBASIC20.29■□□□□ 0.84
CROCCP3Q8IVE0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CROCCP3Q8IVE0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CROCCP3Q8IVE0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.29■□□□□ 0.84
CROCCP3Q8IVE0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.29■□□□□ 0.84
CROCCP3Q8IVE0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CROCCP3Q8IVE0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CROCCP3Q8IVE0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.29■□□□□ 0.84
CROCCP3Q8IVE0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CROCCP3Q8IVE0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.29■□□□□ 0.84
CROCCP3Q8IVE0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.28■□□□□ 0.84
CROCCP3Q8IVE0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CROCCP3Q8IVE0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CROCCP3Q8IVE0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.28■□□□□ 0.84
CROCCP3Q8IVE0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CROCCP3Q8IVE0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CROCCP3Q8IVE0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CROCCP3Q8IVE0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CROCCP3Q8IVE0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CROCCP3Q8IVE0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CROCCP3Q8IVE0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.27■□□□□ 0.84
CROCCP3Q8IVE0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CROCCP3Q8IVE0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CROCCP3Q8IVE0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CROCCP3Q8IVE0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CROCCP3Q8IVE0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CROCCP3Q8IVE0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CROCCP3Q8IVE0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CROCCP3Q8IVE0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CROCCP3Q8IVE0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CROCCP3Q8IVE0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms