Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC71Q8IV32 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.05■□□□□ 0.96
CCDC71Q8IV32 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC71Q8IV32 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC71Q8IV32 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC71Q8IV32 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC71Q8IV32 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC71Q8IV32 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC71Q8IV32 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC71Q8IV32 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC71Q8IV32 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC71Q8IV32 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC71Q8IV32 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC71Q8IV32 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC71Q8IV32 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC71Q8IV32 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC71Q8IV32 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC71Q8IV32 ANOS2P-203ENST00000472227 1816 ntBASIC21.03■□□□□ 0.96
CCDC71Q8IV32 C1orf229-201ENST00000623686 2258 ntBASIC21.03■□□□□ 0.96
CCDC71Q8IV32 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC71Q8IV32 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC71Q8IV32 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC71Q8IV32 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC71Q8IV32 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC71Q8IV32 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC71Q8IV32 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC71Q8IV32 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC71Q8IV32 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC71Q8IV32 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC71Q8IV32 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC71Q8IV32 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC71Q8IV32 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC71Q8IV32 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC71Q8IV32 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC71Q8IV32 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC71Q8IV32 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC71Q8IV32 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC71Q8IV32 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC71Q8IV32 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC71Q8IV32 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC71Q8IV32 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21■□□□□ 0.95
CCDC71Q8IV32 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC71Q8IV32 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC71Q8IV32 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CCDC71Q8IV32 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC71Q8IV32 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.99■□□□□ 0.95
CCDC71Q8IV32 AC010997.5-201ENST00000609182 354 ntBASIC20.99■□□□□ 0.95
CCDC71Q8IV32 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC71Q8IV32 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC71Q8IV32 FOXO3B-201ENST00000395675 1928 ntBASIC20.99■□□□□ 0.95
CCDC71Q8IV32 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC71Q8IV32 DUSP8P3-201ENST00000399571 1760 ntBASIC20.99■□□□□ 0.95
CCDC71Q8IV32 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC71Q8IV32 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.99■□□□□ 0.95
CCDC71Q8IV32 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC71Q8IV32 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC71Q8IV32 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CCDC71Q8IV32 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC71Q8IV32 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.98■□□□□ 0.95
CCDC71Q8IV32 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC71Q8IV32 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC71Q8IV32 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC71Q8IV32 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC71Q8IV32 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC71Q8IV32 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC71Q8IV32 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC71Q8IV32 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC71Q8IV32 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC71Q8IV32 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC71Q8IV32 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC71Q8IV32 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC71Q8IV32 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC71Q8IV32 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC71Q8IV32 MIR935-201ENST00000401179 91 ntBASIC20.97■□□□□ 0.95
CCDC71Q8IV32 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.97■□□□□ 0.95
CCDC71Q8IV32 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CCDC71Q8IV32 AC131281.2-201ENST00000520478 145 ntBASIC20.97■□□□□ 0.95
CCDC71Q8IV32 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC71Q8IV32 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC71Q8IV32 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC71Q8IV32 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC71Q8IV32 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC71Q8IV32 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC71Q8IV32 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC71Q8IV32 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC71Q8IV32 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CCDC71Q8IV32 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC71Q8IV32 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC71Q8IV32 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC71Q8IV32 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC71Q8IV32 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC71Q8IV32 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC71Q8IV32 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC71Q8IV32 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC71Q8IV32 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC71Q8IV32 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CCDC71Q8IV32 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms