Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
PACS2Q86VP3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
PACS2Q86VP3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
PACS2Q86VP3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PACS2Q86VP3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.5■■□□□ 1.19
PACS2Q86VP3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PACS2Q86VP3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PACS2Q86VP3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PACS2Q86VP3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.5■■□□□ 1.19
PACS2Q86VP3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PACS2Q86VP3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PACS2Q86VP3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PACS2Q86VP3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PACS2Q86VP3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.49■■□□□ 1.19
PACS2Q86VP3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PACS2Q86VP3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PACS2Q86VP3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.49■■□□□ 1.19
PACS2Q86VP3 AC007029.1-201ENST00000604183 313 ntBASIC22.49■■□□□ 1.19
PACS2Q86VP3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PACS2Q86VP3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PACS2Q86VP3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PACS2Q86VP3 AL359504.2-201ENST00000605506 1601 ntBASIC22.49■■□□□ 1.19
PACS2Q86VP3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
PACS2Q86VP3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
PACS2Q86VP3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
PACS2Q86VP3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
PACS2Q86VP3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
PACS2Q86VP3 AC025884.2-201ENST00000553429 711 ntBASIC22.48■■□□□ 1.19
PACS2Q86VP3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.48■■□□□ 1.19
PACS2Q86VP3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PACS2Q86VP3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PACS2Q86VP3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PACS2Q86VP3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PACS2Q86VP3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.47■■□□□ 1.19
PACS2Q86VP3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PACS2Q86VP3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PACS2Q86VP3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PACS2Q86VP3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PACS2Q86VP3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PACS2Q86VP3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.46■■□□□ 1.19
PACS2Q86VP3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC22.46■■□□□ 1.19
PACS2Q86VP3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PACS2Q86VP3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.46■■□□□ 1.19
PACS2Q86VP3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.46■■□□□ 1.19
PACS2Q86VP3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PACS2Q86VP3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PACS2Q86VP3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.46■■□□□ 1.19
PACS2Q86VP3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PACS2Q86VP3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PACS2Q86VP3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.45■■□□□ 1.18
PACS2Q86VP3 MIR3960-201ENST00000583311 91 ntBASIC22.45■■□□□ 1.18
PACS2Q86VP3 NTF6A-201ENST00000591175 560 ntBASIC22.45■■□□□ 1.18
PACS2Q86VP3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PACS2Q86VP3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PACS2Q86VP3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.18
PACS2Q86VP3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PACS2Q86VP3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PACS2Q86VP3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PACS2Q86VP3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.44■■□□□ 1.18
PACS2Q86VP3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
PACS2Q86VP3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PACS2Q86VP3 FBXW4P1-201ENST00000426721 2239 ntBASIC22.44■■□□□ 1.18
PACS2Q86VP3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
PACS2Q86VP3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PACS2Q86VP3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PACS2Q86VP3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.43■■□□□ 1.18
PACS2Q86VP3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PACS2Q86VP3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.43■■□□□ 1.18
PACS2Q86VP3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.43■■□□□ 1.18
PACS2Q86VP3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PACS2Q86VP3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
PACS2Q86VP3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PACS2Q86VP3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PACS2Q86VP3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
PACS2Q86VP3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.43■■□□□ 1.18
PACS2Q86VP3 AC026310.3-201ENST00000625186 2373 ntBASIC22.42■■□□□ 1.18
PACS2Q86VP3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PACS2Q86VP3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PACS2Q86VP3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.42■■□□□ 1.18
PACS2Q86VP3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PACS2Q86VP3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.42■■□□□ 1.18
PACS2Q86VP3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.42■■□□□ 1.18
PACS2Q86VP3 RP9P-202ENST00000450133 1212 ntBASIC22.42■■□□□ 1.18
PACS2Q86VP3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
PACS2Q86VP3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PACS2Q86VP3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.42■■□□□ 1.18
PACS2Q86VP3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PACS2Q86VP3 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.41■■□□□ 1.18
PACS2Q86VP3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PACS2Q86VP3 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.41■■□□□ 1.18
PACS2Q86VP3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PACS2Q86VP3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.41■■□□□ 1.18
PACS2Q86VP3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PACS2Q86VP3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PACS2Q86VP3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
PACS2Q86VP3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PACS2Q86VP3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PACS2Q86VP3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PACS2Q86VP3 AC242852.2-201ENST00000615738 1807 ntBASIC22.4■■□□□ 1.18
PACS2Q86VP3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms