Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC190Q86UF4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC190Q86UF4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC190Q86UF4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC190Q86UF4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC190Q86UF4 AC021231.2-201ENST00000594613 730 ntBASIC19.63■□□□□ 0.73
CCDC190Q86UF4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC190Q86UF4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC190Q86UF4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC190Q86UF4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC190Q86UF4 AC080038.3-201ENST00000623346 1952 ntBASIC19.63■□□□□ 0.73
CCDC190Q86UF4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC190Q86UF4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC190Q86UF4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC190Q86UF4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC190Q86UF4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC190Q86UF4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC190Q86UF4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC190Q86UF4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC190Q86UF4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC190Q86UF4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC190Q86UF4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC190Q86UF4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC190Q86UF4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCDC190Q86UF4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC190Q86UF4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC190Q86UF4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC190Q86UF4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC190Q86UF4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC190Q86UF4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC190Q86UF4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC190Q86UF4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC190Q86UF4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC190Q86UF4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC190Q86UF4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC190Q86UF4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC190Q86UF4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC190Q86UF4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
CCDC190Q86UF4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC190Q86UF4 AC005229.4-201ENST00000610085 2198 ntBASIC19.6■□□□□ 0.73
CCDC190Q86UF4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC190Q86UF4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC190Q86UF4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC190Q86UF4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC190Q86UF4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC190Q86UF4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC190Q86UF4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC190Q86UF4 FAM99A-202ENST00000538190 1989 ntBASIC19.59■□□□□ 0.73
CCDC190Q86UF4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC190Q86UF4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC190Q86UF4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC190Q86UF4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC190Q86UF4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC190Q86UF4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC190Q86UF4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC190Q86UF4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC190Q86UF4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC190Q86UF4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC190Q86UF4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC190Q86UF4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC190Q86UF4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC190Q86UF4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC190Q86UF4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC190Q86UF4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC190Q86UF4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC190Q86UF4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC190Q86UF4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC190Q86UF4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC190Q86UF4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC190Q86UF4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC190Q86UF4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC190Q86UF4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC190Q86UF4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC190Q86UF4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC190Q86UF4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC190Q86UF4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC190Q86UF4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC190Q86UF4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC190Q86UF4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC190Q86UF4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC190Q86UF4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC190Q86UF4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC190Q86UF4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC190Q86UF4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC190Q86UF4 HLA-V-202ENST00000446817 847 ntBASIC19.56■□□□□ 0.72
CCDC190Q86UF4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC190Q86UF4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC190Q86UF4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC190Q86UF4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC190Q86UF4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC190Q86UF4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC190Q86UF4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC190Q86UF4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC190Q86UF4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC190Q86UF4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC190Q86UF4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CCDC190Q86UF4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC190Q86UF4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC190Q86UF4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC190Q86UF4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms