Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.34■□□□□ 0.69
RAI1Q7Z5J4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.34■□□□□ 0.69
RAI1Q7Z5J4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAI1Q7Z5J4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.34■□□□□ 0.69
RAI1Q7Z5J4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAI1Q7Z5J4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAI1Q7Z5J4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RAI1Q7Z5J4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.34■□□□□ 0.69
RAI1Q7Z5J4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RAI1Q7Z5J4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAI1Q7Z5J4 LINC01124-201ENST00000409786 2117 ntBASIC19.33■□□□□ 0.69
RAI1Q7Z5J4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.33■□□□□ 0.69
RAI1Q7Z5J4 MIR3181-201ENST00000578512 73 ntBASIC19.33■□□□□ 0.69
RAI1Q7Z5J4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.33■□□□□ 0.69
RAI1Q7Z5J4 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.33■□□□□ 0.69
RAI1Q7Z5J4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RAI1Q7Z5J4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAI1Q7Z5J4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.33■□□□□ 0.69
RAI1Q7Z5J4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RAI1Q7Z5J4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAI1Q7Z5J4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAI1Q7Z5J4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAI1Q7Z5J4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
RAI1Q7Z5J4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.33■□□□□ 0.68
RAI1Q7Z5J4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAI1Q7Z5J4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.33■□□□□ 0.68
RAI1Q7Z5J4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAI1Q7Z5J4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAI1Q7Z5J4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.32■□□□□ 0.68
RAI1Q7Z5J4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RAI1Q7Z5J4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.32■□□□□ 0.68
RAI1Q7Z5J4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.32■□□□□ 0.68
RAI1Q7Z5J4 HLA-L-211ENST00000482052 1765 ntBASIC19.32■□□□□ 0.68
RAI1Q7Z5J4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.32■□□□□ 0.68
RAI1Q7Z5J4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.32■□□□□ 0.68
RAI1Q7Z5J4 AL031602.1-201ENST00000633169 911 ntBASIC19.32■□□□□ 0.68
RAI1Q7Z5J4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAI1Q7Z5J4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RAI1Q7Z5J4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.31■□□□□ 0.68
RAI1Q7Z5J4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAI1Q7Z5J4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RAI1Q7Z5J4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.31■□□□□ 0.68
RAI1Q7Z5J4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAI1Q7Z5J4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RAI1Q7Z5J4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAI1Q7Z5J4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.31■□□□□ 0.68
RAI1Q7Z5J4 AL161729.1-201ENST00000604104 1402 ntBASIC19.31■□□□□ 0.68
RAI1Q7Z5J4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.31■□□□□ 0.68
RAI1Q7Z5J4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.31■□□□□ 0.68
RAI1Q7Z5J4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAI1Q7Z5J4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAI1Q7Z5J4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAI1Q7Z5J4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RAI1Q7Z5J4 KRT18P5-201ENST00000436075 1291 ntBASIC19.3■□□□□ 0.68
RAI1Q7Z5J4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.3■□□□□ 0.68
RAI1Q7Z5J4 AC012414.1-201ENST00000556676 535 ntBASIC19.3■□□□□ 0.68
RAI1Q7Z5J4 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.3■□□□□ 0.68
RAI1Q7Z5J4 AL139125.2-201ENST00000623134 1869 ntBASIC19.3■□□□□ 0.68
RAI1Q7Z5J4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RAI1Q7Z5J4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.29■□□□□ 0.68
RAI1Q7Z5J4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAI1Q7Z5J4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAI1Q7Z5J4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.29■□□□□ 0.68
RAI1Q7Z5J4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.29■□□□□ 0.68
RAI1Q7Z5J4 IKBKGP1-201ENST00000612193 1073 ntBASIC19.29■□□□□ 0.68
RAI1Q7Z5J4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.29■□□□□ 0.68
RAI1Q7Z5J4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAI1Q7Z5J4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RAI1Q7Z5J4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.29■□□□□ 0.68
RAI1Q7Z5J4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.29■□□□□ 0.68
RAI1Q7Z5J4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAI1Q7Z5J4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RAI1Q7Z5J4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAI1Q7Z5J4 LINC00543-201ENST00000567234 1845 ntBASIC19.28■□□□□ 0.68
RAI1Q7Z5J4 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.28■□□□□ 0.68
RAI1Q7Z5J4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RAI1Q7Z5J4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAI1Q7Z5J4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RAI1Q7Z5J4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAI1Q7Z5J4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAI1Q7Z5J4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.28■□□□□ 0.68
RAI1Q7Z5J4 AC135731.1-201ENST00000569415 2548 ntBASIC19.28■□□□□ 0.68
RAI1Q7Z5J4 DUX4L2-201ENST00000561772 1275 ntBASIC19.27■□□□□ 0.68
RAI1Q7Z5J4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
RAI1Q7Z5J4 DUX4L6-201ENST00000626483 1275 ntBASIC19.27■□□□□ 0.68
RAI1Q7Z5J4 DUX4L1-201ENST00000627662 1275 ntBASIC19.27■□□□□ 0.68
RAI1Q7Z5J4 DUX4L8-201ENST00000629013 1275 ntBASIC19.27■□□□□ 0.68
RAI1Q7Z5J4 DUX4L3-201ENST00000630187 1275 ntBASIC19.27■□□□□ 0.68
RAI1Q7Z5J4 DUX4L7-201ENST00000630678 1275 ntBASIC19.27■□□□□ 0.68
RAI1Q7Z5J4 DUX4L5-201ENST00000630834 1275 ntBASIC19.27■□□□□ 0.68
RAI1Q7Z5J4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.27■□□□□ 0.68
RAI1Q7Z5J4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAI1Q7Z5J4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAI1Q7Z5J4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAI1Q7Z5J4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAI1Q7Z5J4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.27■□□□□ 0.68
RAI1Q7Z5J4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RAI1Q7Z5J4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAI1Q7Z5J4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RAI1Q7Z5J4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms