Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDDC2Q7Z4H3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.32■□□□□ 0.84
HDDC2Q7Z4H3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HDDC2Q7Z4H3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
HDDC2Q7Z4H3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.31■□□□□ 0.84
HDDC2Q7Z4H3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDDC2Q7Z4H3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDDC2Q7Z4H3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDDC2Q7Z4H3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDDC2Q7Z4H3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HDDC2Q7Z4H3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDDC2Q7Z4H3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HDDC2Q7Z4H3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.3■□□□□ 0.84
HDDC2Q7Z4H3 BX664725.1-201ENST00000438252 379 ntBASIC20.3■□□□□ 0.84
HDDC2Q7Z4H3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.3■□□□□ 0.84
HDDC2Q7Z4H3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HDDC2Q7Z4H3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDDC2Q7Z4H3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDDC2Q7Z4H3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDDC2Q7Z4H3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDDC2Q7Z4H3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDDC2Q7Z4H3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HDDC2Q7Z4H3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDDC2Q7Z4H3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDDC2Q7Z4H3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDDC2Q7Z4H3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.29■□□□□ 0.84
HDDC2Q7Z4H3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HDDC2Q7Z4H3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.29■□□□□ 0.84
HDDC2Q7Z4H3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HDDC2Q7Z4H3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDDC2Q7Z4H3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.29■□□□□ 0.84
HDDC2Q7Z4H3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDDC2Q7Z4H3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDDC2Q7Z4H3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HDDC2Q7Z4H3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.28■□□□□ 0.84
HDDC2Q7Z4H3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.28■□□□□ 0.84
HDDC2Q7Z4H3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
HDDC2Q7Z4H3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HDDC2Q7Z4H3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HDDC2Q7Z4H3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HDDC2Q7Z4H3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.28■□□□□ 0.84
HDDC2Q7Z4H3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HDDC2Q7Z4H3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HDDC2Q7Z4H3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
HDDC2Q7Z4H3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HDDC2Q7Z4H3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HDDC2Q7Z4H3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.27■□□□□ 0.84
HDDC2Q7Z4H3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.27■□□□□ 0.84
HDDC2Q7Z4H3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.27■□□□□ 0.84
HDDC2Q7Z4H3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
HDDC2Q7Z4H3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HDDC2Q7Z4H3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HDDC2Q7Z4H3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HDDC2Q7Z4H3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDDC2Q7Z4H3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HDDC2Q7Z4H3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDDC2Q7Z4H3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDDC2Q7Z4H3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDDC2Q7Z4H3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDDC2Q7Z4H3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDDC2Q7Z4H3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDDC2Q7Z4H3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDDC2Q7Z4H3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
HDDC2Q7Z4H3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HDDC2Q7Z4H3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HDDC2Q7Z4H3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HDDC2Q7Z4H3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDDC2Q7Z4H3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HDDC2Q7Z4H3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
HDDC2Q7Z4H3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDDC2Q7Z4H3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDDC2Q7Z4H3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDDC2Q7Z4H3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HDDC2Q7Z4H3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.25■□□□□ 0.83
HDDC2Q7Z4H3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDDC2Q7Z4H3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.25■□□□□ 0.83
HDDC2Q7Z4H3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.25■□□□□ 0.83
HDDC2Q7Z4H3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDDC2Q7Z4H3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HDDC2Q7Z4H3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.25■□□□□ 0.83
HDDC2Q7Z4H3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDDC2Q7Z4H3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.25■□□□□ 0.83
HDDC2Q7Z4H3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HDDC2Q7Z4H3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDDC2Q7Z4H3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HDDC2Q7Z4H3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDDC2Q7Z4H3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDDC2Q7Z4H3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.24■□□□□ 0.83
HDDC2Q7Z4H3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDDC2Q7Z4H3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
HDDC2Q7Z4H3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDDC2Q7Z4H3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDDC2Q7Z4H3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.24■□□□□ 0.83
HDDC2Q7Z4H3 KRT125P-201ENST00000546827 989 ntBASIC20.24■□□□□ 0.83
HDDC2Q7Z4H3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HDDC2Q7Z4H3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.24■□□□□ 0.83
HDDC2Q7Z4H3 SNX5-217ENST00000606557 1087 ntBASIC20.24■□□□□ 0.83
HDDC2Q7Z4H3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDDC2Q7Z4H3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDDC2Q7Z4H3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms