Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.71□□□□□ -0.05
SCXQ7RTU7 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.71□□□□□ -0.05
SCXQ7RTU7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SCXQ7RTU7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC14.71□□□□□ -0.05
SCXQ7RTU7 LINC00543-201ENST00000567234 1845 ntBASIC14.71□□□□□ -0.06
SCXQ7RTU7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
SCXQ7RTU7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCXQ7RTU7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCXQ7RTU7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCXQ7RTU7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCXQ7RTU7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCXQ7RTU7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SCXQ7RTU7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCXQ7RTU7 LBH-205ENST00000407930 756 ntTSL 2 BASIC14.7□□□□□ -0.06
SCXQ7RTU7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.7□□□□□ -0.06
SCXQ7RTU7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCXQ7RTU7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCXQ7RTU7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SCXQ7RTU7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SCXQ7RTU7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SCXQ7RTU7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SCXQ7RTU7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SCXQ7RTU7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SCXQ7RTU7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SCXQ7RTU7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.69□□□□□ -0.06
SCXQ7RTU7 AL139125.2-201ENST00000623134 1869 ntBASIC14.69□□□□□ -0.06
SCXQ7RTU7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SCXQ7RTU7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SCXQ7RTU7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SCXQ7RTU7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCXQ7RTU7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SCXQ7RTU7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SCXQ7RTU7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC14.68□□□□□ -0.06
SCXQ7RTU7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCXQ7RTU7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCXQ7RTU7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SCXQ7RTU7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC14.68□□□□□ -0.06
SCXQ7RTU7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCXQ7RTU7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCXQ7RTU7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCXQ7RTU7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SCXQ7RTU7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC14.68□□□□□ -0.06
SCXQ7RTU7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SCXQ7RTU7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCXQ7RTU7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCXQ7RTU7 AC142381.3-201ENST00000568208 1670 ntBASIC14.68□□□□□ -0.06
SCXQ7RTU7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
SCXQ7RTU7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SCXQ7RTU7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SCXQ7RTU7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SCXQ7RTU7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SCXQ7RTU7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC14.67□□□□□ -0.06
SCXQ7RTU7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SCXQ7RTU7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SCXQ7RTU7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.67□□□□□ -0.06
SCXQ7RTU7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.67□□□□□ -0.06
SCXQ7RTU7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SCXQ7RTU7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC14.67□□□□□ -0.06
SCXQ7RTU7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC14.67□□□□□ -0.06
SCXQ7RTU7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC14.67□□□□□ -0.06
SCXQ7RTU7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC14.67□□□□□ -0.06
SCXQ7RTU7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SCXQ7RTU7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SCXQ7RTU7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SCXQ7RTU7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SCXQ7RTU7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SCXQ7RTU7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SCXQ7RTU7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC14.66□□□□□ -0.06
SCXQ7RTU7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SCXQ7RTU7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SCXQ7RTU7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SCXQ7RTU7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SCXQ7RTU7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.66□□□□□ -0.06
SCXQ7RTU7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.66□□□□□ -0.06
SCXQ7RTU7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC14.66□□□□□ -0.06
SCXQ7RTU7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.66□□□□□ -0.06
SCXQ7RTU7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SCXQ7RTU7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC14.66□□□□□ -0.06
SCXQ7RTU7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SCXQ7RTU7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.66□□□□□ -0.06
SCXQ7RTU7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SCXQ7RTU7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
SCXQ7RTU7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SCXQ7RTU7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC14.65□□□□□ -0.06
SCXQ7RTU7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SCXQ7RTU7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC14.65□□□□□ -0.06
SCXQ7RTU7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC14.65□□□□□ -0.06
SCXQ7RTU7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SCXQ7RTU7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC14.65□□□□□ -0.06
SCXQ7RTU7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SCXQ7RTU7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SCXQ7RTU7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SCXQ7RTU7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.65□□□□□ -0.06
SCXQ7RTU7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SCXQ7RTU7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SCXQ7RTU7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC14.65□□□□□ -0.06
SCXQ7RTU7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SCXQ7RTU7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SCXQ7RTU7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SCXQ7RTU7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms