Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
CHMP1BQ7LBR1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP1BQ7LBR1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP1BQ7LBR1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CHMP1BQ7LBR1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP1BQ7LBR1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CHMP1BQ7LBR1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CHMP1BQ7LBR1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP1BQ7LBR1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP1BQ7LBR1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CHMP1BQ7LBR1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP1BQ7LBR1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
CHMP1BQ7LBR1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP1BQ7LBR1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.55■□□□□ 0.88
CHMP1BQ7LBR1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.55■□□□□ 0.88
CHMP1BQ7LBR1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP1BQ7LBR1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP1BQ7LBR1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP1BQ7LBR1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CHMP1BQ7LBR1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP1BQ7LBR1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.54■□□□□ 0.88
CHMP1BQ7LBR1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP1BQ7LBR1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP1BQ7LBR1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP1BQ7LBR1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP1BQ7LBR1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMP1BQ7LBR1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP1BQ7LBR1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP1BQ7LBR1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP1BQ7LBR1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP1BQ7LBR1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 AL136116.3-201ENST00000402907 1138 ntBASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.53■□□□□ 0.88
CHMP1BQ7LBR1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP1BQ7LBR1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP1BQ7LBR1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CHMP1BQ7LBR1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP1BQ7LBR1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CHMP1BQ7LBR1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHMP1BQ7LBR1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHMP1BQ7LBR1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
CHMP1BQ7LBR1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP1BQ7LBR1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.51■□□□□ 0.87
CHMP1BQ7LBR1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CHMP1BQ7LBR1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CHMP1BQ7LBR1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP1BQ7LBR1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CHMP1BQ7LBR1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.51■□□□□ 0.87
CHMP1BQ7LBR1 AC131281.2-201ENST00000520478 145 ntBASIC20.51■□□□□ 0.87
CHMP1BQ7LBR1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.51■□□□□ 0.87
CHMP1BQ7LBR1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.51■□□□□ 0.87
CHMP1BQ7LBR1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP1BQ7LBR1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP1BQ7LBR1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMP1BQ7LBR1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CHMP1BQ7LBR1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP1BQ7LBR1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP1BQ7LBR1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMP1BQ7LBR1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP1BQ7LBR1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP1BQ7LBR1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP1BQ7LBR1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP1BQ7LBR1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP1BQ7LBR1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.49■□□□□ 0.87
CHMP1BQ7LBR1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP1BQ7LBR1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP1BQ7LBR1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.49■□□□□ 0.87
CHMP1BQ7LBR1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CHMP1BQ7LBR1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP1BQ7LBR1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP1BQ7LBR1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.49■□□□□ 0.87
CHMP1BQ7LBR1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP1BQ7LBR1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP1BQ7LBR1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CHMP1BQ7LBR1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.49■□□□□ 0.87
CHMP1BQ7LBR1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP1BQ7LBR1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP1BQ7LBR1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP1BQ7LBR1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP1BQ7LBR1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP1BQ7LBR1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP1BQ7LBR1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP1BQ7LBR1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
CHMP1BQ7LBR1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP1BQ7LBR1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms