Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST3H2AQ7L7L0 AC137630.3-201ENST00000607245 391 ntBASIC20.43■□□□□ 0.86
HIST3H2AQ7L7L0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST3H2AQ7L7L0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HIST3H2AQ7L7L0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
HIST3H2AQ7L7L0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
HIST3H2AQ7L7L0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.42■□□□□ 0.86
HIST3H2AQ7L7L0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.42■□□□□ 0.86
HIST3H2AQ7L7L0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HIST3H2AQ7L7L0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HIST3H2AQ7L7L0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
HIST3H2AQ7L7L0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.42■□□□□ 0.86
HIST3H2AQ7L7L0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HIST3H2AQ7L7L0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HIST3H2AQ7L7L0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.42■□□□□ 0.86
HIST3H2AQ7L7L0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST3H2AQ7L7L0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.42■□□□□ 0.86
HIST3H2AQ7L7L0 AC092068.2-201ENST00000590491 1708 ntBASIC20.41■□□□□ 0.86
HIST3H2AQ7L7L0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST3H2AQ7L7L0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST3H2AQ7L7L0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.41■□□□□ 0.86
HIST3H2AQ7L7L0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST3H2AQ7L7L0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST3H2AQ7L7L0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST3H2AQ7L7L0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST3H2AQ7L7L0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.41■□□□□ 0.86
HIST3H2AQ7L7L0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.4■□□□□ 0.86
HIST3H2AQ7L7L0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST3H2AQ7L7L0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST3H2AQ7L7L0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HIST3H2AQ7L7L0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HIST3H2AQ7L7L0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.4■□□□□ 0.86
HIST3H2AQ7L7L0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST3H2AQ7L7L0 BX664725.1-201ENST00000438252 379 ntBASIC20.4■□□□□ 0.86
HIST3H2AQ7L7L0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST3H2AQ7L7L0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
HIST3H2AQ7L7L0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST3H2AQ7L7L0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.4■□□□□ 0.86
HIST3H2AQ7L7L0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.4■□□□□ 0.86
HIST3H2AQ7L7L0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HIST3H2AQ7L7L0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIST3H2AQ7L7L0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HIST3H2AQ7L7L0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIST3H2AQ7L7L0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIST3H2AQ7L7L0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
HIST3H2AQ7L7L0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST3H2AQ7L7L0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST3H2AQ7L7L0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.39■□□□□ 0.85
HIST3H2AQ7L7L0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HIST3H2AQ7L7L0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.39■□□□□ 0.85
HIST3H2AQ7L7L0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HIST3H2AQ7L7L0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
HIST3H2AQ7L7L0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST3H2AQ7L7L0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST3H2AQ7L7L0 CLDN5-201ENST00000403084 2357 ntBASIC20.38■□□□□ 0.85
HIST3H2AQ7L7L0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.38■□□□□ 0.85
HIST3H2AQ7L7L0 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.38■□□□□ 0.85
HIST3H2AQ7L7L0 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.38■□□□□ 0.85
HIST3H2AQ7L7L0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HIST3H2AQ7L7L0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.38■□□□□ 0.85
HIST3H2AQ7L7L0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HIST3H2AQ7L7L0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.38■□□□□ 0.85
HIST3H2AQ7L7L0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST3H2AQ7L7L0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.38■□□□□ 0.85
HIST3H2AQ7L7L0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST3H2AQ7L7L0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.38■□□□□ 0.85
HIST3H2AQ7L7L0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST3H2AQ7L7L0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIST3H2AQ7L7L0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST3H2AQ7L7L0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIST3H2AQ7L7L0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST3H2AQ7L7L0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST3H2AQ7L7L0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST3H2AQ7L7L0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.37■□□□□ 0.85
HIST3H2AQ7L7L0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.37■□□□□ 0.85
HIST3H2AQ7L7L0 SNX5-217ENST00000606557 1087 ntBASIC20.37■□□□□ 0.85
HIST3H2AQ7L7L0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST3H2AQ7L7L0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST3H2AQ7L7L0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIST3H2AQ7L7L0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIST3H2AQ7L7L0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST3H2AQ7L7L0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST3H2AQ7L7L0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST3H2AQ7L7L0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST3H2AQ7L7L0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.36■□□□□ 0.85
HIST3H2AQ7L7L0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HIST3H2AQ7L7L0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST3H2AQ7L7L0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST3H2AQ7L7L0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.36■□□□□ 0.85
HIST3H2AQ7L7L0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST3H2AQ7L7L0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HIST3H2AQ7L7L0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.35■□□□□ 0.85
HIST3H2AQ7L7L0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST3H2AQ7L7L0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
HIST3H2AQ7L7L0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST3H2AQ7L7L0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.35■□□□□ 0.85
HIST3H2AQ7L7L0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.35■□□□□ 0.85
HIST3H2AQ7L7L0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.35■□□□□ 0.85
HIST3H2AQ7L7L0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HIST3H2AQ7L7L0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms