Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.81■■□□□ 1.08
RNF111Q6ZNA4 AL031848.2-201ENST00000607670 837 ntBASIC21.81■■□□□ 1.08
RNF111Q6ZNA4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF111Q6ZNA4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF111Q6ZNA4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.8■■□□□ 1.08
RNF111Q6ZNA4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF111Q6ZNA4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF111Q6ZNA4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF111Q6ZNA4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF111Q6ZNA4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RNF111Q6ZNA4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF111Q6ZNA4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF111Q6ZNA4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF111Q6ZNA4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF111Q6ZNA4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF111Q6ZNA4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RNF111Q6ZNA4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF111Q6ZNA4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RNF111Q6ZNA4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF111Q6ZNA4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF111Q6ZNA4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RNF111Q6ZNA4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF111Q6ZNA4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF111Q6ZNA4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF111Q6ZNA4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF111Q6ZNA4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF111Q6ZNA4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF111Q6ZNA4 AC090877.2-201ENST00000558441 1738 ntBASIC21.79■■□□□ 1.08
RNF111Q6ZNA4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF111Q6ZNA4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF111Q6ZNA4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF111Q6ZNA4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RNF111Q6ZNA4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF111Q6ZNA4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.78■■□□□ 1.08
RNF111Q6ZNA4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF111Q6ZNA4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF111Q6ZNA4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
RNF111Q6ZNA4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.78■■□□□ 1.08
RNF111Q6ZNA4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RNF111Q6ZNA4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF111Q6ZNA4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RNF111Q6ZNA4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF111Q6ZNA4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF111Q6ZNA4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.77■■□□□ 1.08
RNF111Q6ZNA4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF111Q6ZNA4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF111Q6ZNA4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF111Q6ZNA4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RNF111Q6ZNA4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF111Q6ZNA4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF111Q6ZNA4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
RNF111Q6ZNA4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RNF111Q6ZNA4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF111Q6ZNA4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF111Q6ZNA4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF111Q6ZNA4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF111Q6ZNA4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF111Q6ZNA4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF111Q6ZNA4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF111Q6ZNA4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF111Q6ZNA4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
RNF111Q6ZNA4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RNF111Q6ZNA4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF111Q6ZNA4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RNF111Q6ZNA4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF111Q6ZNA4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF111Q6ZNA4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF111Q6ZNA4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF111Q6ZNA4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
RNF111Q6ZNA4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF111Q6ZNA4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.75■■□□□ 1.07
RNF111Q6ZNA4 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.75■■□□□ 1.07
RNF111Q6ZNA4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.75■■□□□ 1.07
RNF111Q6ZNA4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF111Q6ZNA4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF111Q6ZNA4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.75■■□□□ 1.07
RNF111Q6ZNA4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF111Q6ZNA4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF111Q6ZNA4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF111Q6ZNA4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF111Q6ZNA4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RNF111Q6ZNA4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
RNF111Q6ZNA4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.73■■□□□ 1.07
RNF111Q6ZNA4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RNF111Q6ZNA4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF111Q6ZNA4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RNF111Q6ZNA4 AC092068.2-201ENST00000590491 1708 ntBASIC21.73■■□□□ 1.07
RNF111Q6ZNA4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF111Q6ZNA4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF111Q6ZNA4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RNF111Q6ZNA4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF111Q6ZNA4 SLC25A24-204ENST00000569674 2357 ntBASIC21.73■■□□□ 1.07
RNF111Q6ZNA4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF111Q6ZNA4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF111Q6ZNA4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF111Q6ZNA4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF111Q6ZNA4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF111Q6ZNA4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RNF111Q6ZNA4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF111Q6ZNA4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms