Protein–RNA interactions for Protein: Q6UWN0

LYPD4, Ly6/PLAUR domain-containing protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD4Q6UWN0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYPD4Q6UWN0 EP400NL-214ENST00000641289 2402 ntBASIC20.12■□□□□ 0.81
LYPD4Q6UWN0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LYPD4Q6UWN0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
LYPD4Q6UWN0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LYPD4Q6UWN0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.11■□□□□ 0.81
LYPD4Q6UWN0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYPD4Q6UWN0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYPD4Q6UWN0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYPD4Q6UWN0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
LYPD4Q6UWN0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.11■□□□□ 0.81
LYPD4Q6UWN0 THA1P-201ENST00000590384 1145 ntBASIC20.11■□□□□ 0.81
LYPD4Q6UWN0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYPD4Q6UWN0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LYPD4Q6UWN0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
LYPD4Q6UWN0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYPD4Q6UWN0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYPD4Q6UWN0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYPD4Q6UWN0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYPD4Q6UWN0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYPD4Q6UWN0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYPD4Q6UWN0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYPD4Q6UWN0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYPD4Q6UWN0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYPD4Q6UWN0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.1■□□□□ 0.81
LYPD4Q6UWN0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
LYPD4Q6UWN0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.1■□□□□ 0.81
LYPD4Q6UWN0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
LYPD4Q6UWN0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LYPD4Q6UWN0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYPD4Q6UWN0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYPD4Q6UWN0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYPD4Q6UWN0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYPD4Q6UWN0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYPD4Q6UWN0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.09■□□□□ 0.81
LYPD4Q6UWN0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYPD4Q6UWN0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LYPD4Q6UWN0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
LYPD4Q6UWN0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYPD4Q6UWN0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYPD4Q6UWN0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.09■□□□□ 0.81
LYPD4Q6UWN0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYPD4Q6UWN0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
LYPD4Q6UWN0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYPD4Q6UWN0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LYPD4Q6UWN0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.08■□□□□ 0.81
LYPD4Q6UWN0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LYPD4Q6UWN0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.08■□□□□ 0.81
LYPD4Q6UWN0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.08■□□□□ 0.81
LYPD4Q6UWN0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LYPD4Q6UWN0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LYPD4Q6UWN0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
LYPD4Q6UWN0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
LYPD4Q6UWN0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LYPD4Q6UWN0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LYPD4Q6UWN0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LYPD4Q6UWN0 KRT18P24-201ENST00000344739 1156 ntBASIC20.08■□□□□ 0.81
LYPD4Q6UWN0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LYPD4Q6UWN0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.08■□□□□ 0.81
LYPD4Q6UWN0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.08■□□□□ 0.81
LYPD4Q6UWN0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.08■□□□□ 0.8
LYPD4Q6UWN0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
LYPD4Q6UWN0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LYPD4Q6UWN0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
LYPD4Q6UWN0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LYPD4Q6UWN0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LYPD4Q6UWN0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LYPD4Q6UWN0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LYPD4Q6UWN0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYPD4Q6UWN0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
LYPD4Q6UWN0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.07■□□□□ 0.8
LYPD4Q6UWN0 AL033527.3-201ENST00000566366 1196 ntBASIC20.07■□□□□ 0.8
LYPD4Q6UWN0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LYPD4Q6UWN0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.07■□□□□ 0.8
LYPD4Q6UWN0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.07■□□□□ 0.8
LYPD4Q6UWN0 AC074183.2-201ENST00000623112 922 ntBASIC20.07■□□□□ 0.8
LYPD4Q6UWN0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LYPD4Q6UWN0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYPD4Q6UWN0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.07■□□□□ 0.8
LYPD4Q6UWN0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LYPD4Q6UWN0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LYPD4Q6UWN0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.06■□□□□ 0.8
LYPD4Q6UWN0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.06■□□□□ 0.8
LYPD4Q6UWN0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.06■□□□□ 0.8
LYPD4Q6UWN0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LYPD4Q6UWN0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.05■□□□□ 0.8
LYPD4Q6UWN0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.05■□□□□ 0.8
LYPD4Q6UWN0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.05■□□□□ 0.8
LYPD4Q6UWN0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYPD4Q6UWN0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYPD4Q6UWN0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYPD4Q6UWN0 AC079630.1-202ENST00000618127 1840 ntBASIC20.05■□□□□ 0.8
LYPD4Q6UWN0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYPD4Q6UWN0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LYPD4Q6UWN0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYPD4Q6UWN0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LYPD4Q6UWN0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYPD4Q6UWN0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LYPD4Q6UWN0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LYPD4Q6UWN0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms