Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC27.41■■□□□ 1.98
CASC1Q6TDU7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC27.41■■□□□ 1.98
CASC1Q6TDU7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CASC1Q6TDU7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC27.41■■□□□ 1.98
CASC1Q6TDU7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CASC1Q6TDU7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC27.4■■□□□ 1.98
CASC1Q6TDU7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CASC1Q6TDU7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CASC1Q6TDU7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
CASC1Q6TDU7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CASC1Q6TDU7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.4■■□□□ 1.98
CASC1Q6TDU7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC27.4■■□□□ 1.98
CASC1Q6TDU7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC27.4■■□□□ 1.98
CASC1Q6TDU7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CASC1Q6TDU7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CASC1Q6TDU7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CASC1Q6TDU7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC27.4■■□□□ 1.98
CASC1Q6TDU7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC27.4■■□□□ 1.98
CASC1Q6TDU7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC27.4■■□□□ 1.98
CASC1Q6TDU7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CASC1Q6TDU7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CASC1Q6TDU7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CASC1Q6TDU7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC27.39■■□□□ 1.98
CASC1Q6TDU7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CASC1Q6TDU7 AL031848.2-201ENST00000607670 837 ntBASIC27.39■■□□□ 1.98
CASC1Q6TDU7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
CASC1Q6TDU7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CASC1Q6TDU7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
CASC1Q6TDU7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.39■■□□□ 1.97
CASC1Q6TDU7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CASC1Q6TDU7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CASC1Q6TDU7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC27.38■■□□□ 1.97
CASC1Q6TDU7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC27.38■■□□□ 1.97
CASC1Q6TDU7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CASC1Q6TDU7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC27.38■■□□□ 1.97
CASC1Q6TDU7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CASC1Q6TDU7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC27.38■■□□□ 1.97
CASC1Q6TDU7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CASC1Q6TDU7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CASC1Q6TDU7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CASC1Q6TDU7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CASC1Q6TDU7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CASC1Q6TDU7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
CASC1Q6TDU7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC27.37■■□□□ 1.97
CASC1Q6TDU7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
CASC1Q6TDU7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CASC1Q6TDU7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
CASC1Q6TDU7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC27.36■■□□□ 1.97
CASC1Q6TDU7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.36■■□□□ 1.97
CASC1Q6TDU7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC27.36■■□□□ 1.97
CASC1Q6TDU7 SNX5-217ENST00000606557 1087 ntBASIC27.36■■□□□ 1.97
CASC1Q6TDU7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC27.36■■□□□ 1.97
CASC1Q6TDU7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC27.36■■□□□ 1.97
CASC1Q6TDU7 AC079630.1-202ENST00000618127 1840 ntBASIC27.36■■□□□ 1.97
CASC1Q6TDU7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC27.36■■□□□ 1.97
CASC1Q6TDU7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC27.36■■□□□ 1.97
CASC1Q6TDU7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
CASC1Q6TDU7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC27.35■■□□□ 1.97
CASC1Q6TDU7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC27.35■■□□□ 1.97
CASC1Q6TDU7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CASC1Q6TDU7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC27.35■■□□□ 1.97
CASC1Q6TDU7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.35■■□□□ 1.97
CASC1Q6TDU7 AC137630.3-201ENST00000607245 391 ntBASIC27.35■■□□□ 1.97
CASC1Q6TDU7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
CASC1Q6TDU7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CASC1Q6TDU7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CASC1Q6TDU7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
CASC1Q6TDU7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC27.35■■□□□ 1.97
CASC1Q6TDU7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC27.35■■□□□ 1.97
CASC1Q6TDU7 REST-206ENST00000612429 1376 ntTSL 5 BASIC27.35■■□□□ 1.97
CASC1Q6TDU7 REST-207ENST00000616975 1370 ntTSL 5 BASIC27.35■■□□□ 1.97
CASC1Q6TDU7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CASC1Q6TDU7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
CASC1Q6TDU7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
CASC1Q6TDU7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CASC1Q6TDU7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CASC1Q6TDU7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CASC1Q6TDU7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
CASC1Q6TDU7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CASC1Q6TDU7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CASC1Q6TDU7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC27.34■■□□□ 1.97
CASC1Q6TDU7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC27.34■■□□□ 1.97
CASC1Q6TDU7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CASC1Q6TDU7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CASC1Q6TDU7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC27.33■■□□□ 1.97
CASC1Q6TDU7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CASC1Q6TDU7 AC233723.2-201ENST00000623798 2106 ntBASIC27.33■■□□□ 1.97
CASC1Q6TDU7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CASC1Q6TDU7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CASC1Q6TDU7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CASC1Q6TDU7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC27.32■■□□□ 1.96
CASC1Q6TDU7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CASC1Q6TDU7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CASC1Q6TDU7 AC079834.2-201ENST00000609776 1949 ntBASIC27.32■■□□□ 1.96
CASC1Q6TDU7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CASC1Q6TDU7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC27.32■■□□□ 1.96
CASC1Q6TDU7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CASC1Q6TDU7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
CASC1Q6TDU7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
CASC1Q6TDU7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms