Protein–RNA interactions for Protein: Q5VVQ6

YOD1, Ubiquitin thioesterase OTU1, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YOD1Q5VVQ6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
YOD1Q5VVQ6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.32■■□□□ 1
YOD1Q5VVQ6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
YOD1Q5VVQ6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
YOD1Q5VVQ6 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.31■■□□□ 1
YOD1Q5VVQ6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.31■■□□□ 1
YOD1Q5VVQ6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.31■■□□□ 1
YOD1Q5VVQ6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.31■■□□□ 1
YOD1Q5VVQ6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.31■■□□□ 1
YOD1Q5VVQ6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
YOD1Q5VVQ6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
YOD1Q5VVQ6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.31■■□□□ 1
YOD1Q5VVQ6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.3■■□□□ 1
YOD1Q5VVQ6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
YOD1Q5VVQ6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.3■■□□□ 1
YOD1Q5VVQ6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.3■■□□□ 1
YOD1Q5VVQ6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.3■■□□□ 1
YOD1Q5VVQ6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.3■■□□□ 1
YOD1Q5VVQ6 AC136469.2-201ENST00000623944 1028 ntBASIC21.3■■□□□ 1
YOD1Q5VVQ6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.3■■□□□ 1
YOD1Q5VVQ6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.29■■□□□ 1
YOD1Q5VVQ6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.29■■□□□ 1
YOD1Q5VVQ6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
YOD1Q5VVQ6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.29■■□□□ 1
YOD1Q5VVQ6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.29■■□□□ 1
YOD1Q5VVQ6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
YOD1Q5VVQ6 AC142381.2-201ENST00000566120 298 ntBASIC21.29■■□□□ 1
YOD1Q5VVQ6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.29■■□□□ 1
YOD1Q5VVQ6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
YOD1Q5VVQ6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.29■■□□□ 1
YOD1Q5VVQ6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.28■■□□□ 1
YOD1Q5VVQ6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.28■■□□□ 1
YOD1Q5VVQ6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
YOD1Q5VVQ6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.28■■□□□ 1
YOD1Q5VVQ6 AC006455.2-201ENST00000429931 906 ntBASIC21.28■■□□□ 1
YOD1Q5VVQ6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.28■■□□□ 1
YOD1Q5VVQ6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
YOD1Q5VVQ6 MIR3181-201ENST00000578512 73 ntBASIC21.28■■□□□ 1
YOD1Q5VVQ6 AL031432.3-201ENST00000607698 485 ntBASIC21.28■■□□□ 1
YOD1Q5VVQ6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
YOD1Q5VVQ6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
YOD1Q5VVQ6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
YOD1Q5VVQ6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
YOD1Q5VVQ6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.27■■□□□ 1
YOD1Q5VVQ6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.27■■□□□ 1
YOD1Q5VVQ6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.27■■□□□ 1
YOD1Q5VVQ6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
YOD1Q5VVQ6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.27■■□□□ 1
YOD1Q5VVQ6 SUDS3P1-201ENST00000505831 966 ntBASIC21.27■■□□□ 1
YOD1Q5VVQ6 DUX4L4-201ENST00000566884 1269 ntBASIC21.27■■□□□ 1
YOD1Q5VVQ6 MIR4767-201ENST00000582827 78 ntBASIC21.27■■□□□ 1
YOD1Q5VVQ6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
YOD1Q5VVQ6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.27■■□□□ 1
YOD1Q5VVQ6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.27■□□□□ 0.99
YOD1Q5VVQ6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
YOD1Q5VVQ6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
YOD1Q5VVQ6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
YOD1Q5VVQ6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
YOD1Q5VVQ6 AC144652.1-201ENST00000609974 1624 ntBASIC21.26■□□□□ 0.99
YOD1Q5VVQ6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
YOD1Q5VVQ6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
YOD1Q5VVQ6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
YOD1Q5VVQ6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.26■□□□□ 0.99
YOD1Q5VVQ6 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.26■□□□□ 0.99
YOD1Q5VVQ6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.26■□□□□ 0.99
YOD1Q5VVQ6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.26■□□□□ 0.99
YOD1Q5VVQ6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
YOD1Q5VVQ6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.25■□□□□ 0.99
YOD1Q5VVQ6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
YOD1Q5VVQ6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
YOD1Q5VVQ6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.25■□□□□ 0.99
YOD1Q5VVQ6 pRNA.6-201ENST00000610482 90 ntBASIC21.25■□□□□ 0.99
YOD1Q5VVQ6 pRNA.5-201ENST00000612139 90 ntBASIC21.25■□□□□ 0.99
YOD1Q5VVQ6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.25■□□□□ 0.99
YOD1Q5VVQ6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.25■□□□□ 0.99
YOD1Q5VVQ6 pRNA.11-201ENST00000618423 90 ntBASIC21.25■□□□□ 0.99
YOD1Q5VVQ6 pRNA.13-201ENST00000619112 90 ntBASIC21.25■□□□□ 0.99
YOD1Q5VVQ6 AC004812.2-201ENST00000611079 2094 ntBASIC21.25■□□□□ 0.99
YOD1Q5VVQ6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
YOD1Q5VVQ6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
YOD1Q5VVQ6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
YOD1Q5VVQ6 AC093323.1-202ENST00000635031 2045 ntBASIC21.24■□□□□ 0.99
YOD1Q5VVQ6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.24■□□□□ 0.99
YOD1Q5VVQ6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
YOD1Q5VVQ6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.24■□□□□ 0.99
YOD1Q5VVQ6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
YOD1Q5VVQ6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
YOD1Q5VVQ6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
YOD1Q5VVQ6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.23■□□□□ 0.99
YOD1Q5VVQ6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
YOD1Q5VVQ6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
YOD1Q5VVQ6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.23■□□□□ 0.99
YOD1Q5VVQ6 AL499627.2-201ENST00000606283 725 ntBASIC21.23■□□□□ 0.99
YOD1Q5VVQ6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
YOD1Q5VVQ6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
YOD1Q5VVQ6 LINC01529-204ENST00000636474 1715 ntBASIC21.23■□□□□ 0.99
YOD1Q5VVQ6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
YOD1Q5VVQ6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.23■□□□□ 0.99
YOD1Q5VVQ6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
YOD1Q5VVQ6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms