Protein–RNA interactions for Protein: Q5R3I4

TTC38, Tetratricopeptide repeat protein 38, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38Q5R3I4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
TTC38Q5R3I4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TTC38Q5R3I4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.65■■□□□ 1.7
TTC38Q5R3I4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.65■■□□□ 1.7
TTC38Q5R3I4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.65■■□□□ 1.7
TTC38Q5R3I4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.64■■□□□ 1.7
TTC38Q5R3I4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TTC38Q5R3I4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
TTC38Q5R3I4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TTC38Q5R3I4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
TTC38Q5R3I4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.64■■□□□ 1.7
TTC38Q5R3I4 KRT16P3-201ENST00000439127 1283 ntBASIC25.64■■□□□ 1.7
TTC38Q5R3I4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
TTC38Q5R3I4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
TTC38Q5R3I4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
TTC38Q5R3I4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.69
TTC38Q5R3I4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
TTC38Q5R3I4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TTC38Q5R3I4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
TTC38Q5R3I4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.63■■□□□ 1.69
TTC38Q5R3I4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TTC38Q5R3I4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.63■■□□□ 1.69
TTC38Q5R3I4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.63■■□□□ 1.69
TTC38Q5R3I4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TTC38Q5R3I4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
TTC38Q5R3I4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TTC38Q5R3I4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
TTC38Q5R3I4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
TTC38Q5R3I4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
TTC38Q5R3I4 MIR6724-1-201ENST00000616420 92 ntBASIC25.62■■□□□ 1.69
TTC38Q5R3I4 MIR6724-2-201ENST00000616483 92 ntBASIC25.62■■□□□ 1.69
TTC38Q5R3I4 MIR6724-4-201ENST00000617390 92 ntBASIC25.62■■□□□ 1.69
TTC38Q5R3I4 MIR6724-3-201ENST00000622482 92 ntBASIC25.62■■□□□ 1.69
TTC38Q5R3I4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
TTC38Q5R3I4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
TTC38Q5R3I4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.62■■□□□ 1.69
TTC38Q5R3I4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.62■■□□□ 1.69
TTC38Q5R3I4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
TTC38Q5R3I4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
TTC38Q5R3I4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.61■■□□□ 1.69
TTC38Q5R3I4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.61■■□□□ 1.69
TTC38Q5R3I4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.61■■□□□ 1.69
TTC38Q5R3I4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TTC38Q5R3I4 C9orf163-202ENST00000624034 2573 ntBASIC25.6■■□□□ 1.69
TTC38Q5R3I4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.6■■□□□ 1.69
TTC38Q5R3I4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.6■■□□□ 1.69
TTC38Q5R3I4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.6■■□□□ 1.69
TTC38Q5R3I4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
TTC38Q5R3I4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.6■■□□□ 1.69
TTC38Q5R3I4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC38Q5R3I4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TTC38Q5R3I4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC38Q5R3I4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.59■■□□□ 1.69
TTC38Q5R3I4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC38Q5R3I4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TTC38Q5R3I4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TTC38Q5R3I4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.59■■□□□ 1.69
TTC38Q5R3I4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.59■■□□□ 1.69
TTC38Q5R3I4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.59■■□□□ 1.69
TTC38Q5R3I4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
TTC38Q5R3I4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TTC38Q5R3I4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
TTC38Q5R3I4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.58■■□□□ 1.69
TTC38Q5R3I4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
TTC38Q5R3I4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TTC38Q5R3I4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TTC38Q5R3I4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
TTC38Q5R3I4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TTC38Q5R3I4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TTC38Q5R3I4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TTC38Q5R3I4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.57■■□□□ 1.68
TTC38Q5R3I4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.56■■□□□ 1.68
TTC38Q5R3I4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TTC38Q5R3I4 AC009102.2-201ENST00000606772 1639 ntBASIC25.56■■□□□ 1.68
TTC38Q5R3I4 AC068473.5-201ENST00000616428 2072 ntBASIC25.56■■□□□ 1.68
TTC38Q5R3I4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TTC38Q5R3I4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
TTC38Q5R3I4 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.56■■□□□ 1.68
TTC38Q5R3I4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
TTC38Q5R3I4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TTC38Q5R3I4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.56■■□□□ 1.68
TTC38Q5R3I4 AC144652.1-201ENST00000609974 1624 ntBASIC25.55■■□□□ 1.68
TTC38Q5R3I4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TTC38Q5R3I4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC38Q5R3I4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TTC38Q5R3I4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.55■■□□□ 1.68
TTC38Q5R3I4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.55■■□□□ 1.68
TTC38Q5R3I4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.55■■□□□ 1.68
TTC38Q5R3I4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
TTC38Q5R3I4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC38Q5R3I4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC38Q5R3I4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.55■■□□□ 1.68
TTC38Q5R3I4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.55■■□□□ 1.68
TTC38Q5R3I4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TTC38Q5R3I4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TTC38Q5R3I4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.54■■□□□ 1.68
TTC38Q5R3I4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TTC38Q5R3I4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.54■■□□□ 1.68
TTC38Q5R3I4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.54■■□□□ 1.68
TTC38Q5R3I4 AL353803.4-201ENST00000565882 1934 ntBASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms