Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 AC092171.4-201ENST00000609130 632 ntBASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 AC241377.3-202ENST00000626088 1088 ntBASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 AC241585.3-202ENST00000628937 1088 ntBASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 AC245100.8-202ENST00000629247 1058 ntBASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC01556Q5JQF7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LINC01556Q5JQF7 AC008406.3-201ENST00000620001 1374 ntBASIC15.27■□□□□ 0.04
LINC01556Q5JQF7 FP325331.1-202ENST00000623531 1380 ntBASIC15.27■□□□□ 0.04
LINC01556Q5JQF7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC01556Q5JQF7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.27■□□□□ 0.04
LINC01556Q5JQF7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LINC01556Q5JQF7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC01556Q5JQF7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC01556Q5JQF7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LINC01556Q5JQF7 AC144652.1-201ENST00000609974 1624 ntBASIC15.27■□□□□ 0.03
LINC01556Q5JQF7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
LINC01556Q5JQF7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC01556Q5JQF7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC01556Q5JQF7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC01556Q5JQF7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
LINC01556Q5JQF7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC01556Q5JQF7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LINC01556Q5JQF7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LINC01556Q5JQF7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01556Q5JQF7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01556Q5JQF7 MIR4466-201ENST00000606121 54 ntBASIC15.26■□□□□ 0.03
LINC01556Q5JQF7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.26■□□□□ 0.03
LINC01556Q5JQF7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC01556Q5JQF7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC01556Q5JQF7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01556Q5JQF7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC01556Q5JQF7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC01556Q5JQF7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LINC01556Q5JQF7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01556Q5JQF7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01556Q5JQF7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01556Q5JQF7 AL136116.3-201ENST00000402907 1138 ntBASIC15.25■□□□□ 0.03
LINC01556Q5JQF7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01556Q5JQF7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC01556Q5JQF7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC01556Q5JQF7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
LINC01556Q5JQF7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LINC01556Q5JQF7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
LINC01556Q5JQF7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC01556Q5JQF7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01556Q5JQF7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01556Q5JQF7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LINC01556Q5JQF7 AC092068.2-201ENST00000590491 1708 ntBASIC15.24■□□□□ 0.03
LINC01556Q5JQF7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01556Q5JQF7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01556Q5JQF7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01556Q5JQF7 ANOS2P-203ENST00000472227 1816 ntBASIC15.24■□□□□ 0.03
LINC01556Q5JQF7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LINC01556Q5JQF7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01556Q5JQF7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01556Q5JQF7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC01556Q5JQF7 AC079630.1-202ENST00000618127 1840 ntBASIC15.23■□□□□ 0.03
LINC01556Q5JQF7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01556Q5JQF7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01556Q5JQF7 DUX4L19-201ENST00000557448 1267 ntBASIC15.23■□□□□ 0.03
LINC01556Q5JQF7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01556Q5JQF7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01556Q5JQF7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LINC01556Q5JQF7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC01556Q5JQF7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LINC01556Q5JQF7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01556Q5JQF7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01556Q5JQF7 LINC01529-204ENST00000636474 1715 ntBASIC15.23■□□□□ 0.03
LINC01556Q5JQF7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
LINC01556Q5JQF7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01556Q5JQF7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01556Q5JQF7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LINC01556Q5JQF7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01556Q5JQF7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.22■□□□□ 0.03
LINC01556Q5JQF7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01556Q5JQF7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC01556Q5JQF7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01556Q5JQF7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LINC01556Q5JQF7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01556Q5JQF7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01556Q5JQF7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01556Q5JQF7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LINC01556Q5JQF7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01556Q5JQF7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC01556Q5JQF7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01556Q5JQF7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms