Protein–RNA interactions for Protein: Q4V339

CBWD6, COBW domain-containing protein 6, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6Q4V339 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.4■■□□□ 1.5
CBWD6Q4V339 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.4■■□□□ 1.5
CBWD6Q4V339 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
CBWD6Q4V339 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
CBWD6Q4V339 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CBWD6Q4V339 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.39■■□□□ 1.5
CBWD6Q4V339 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CBWD6Q4V339 GUSBP5-201ENST00000418136 578 ntBASIC24.39■■□□□ 1.49
CBWD6Q4V339 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CBWD6Q4V339 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.39■■□□□ 1.49
CBWD6Q4V339 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
CBWD6Q4V339 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
CBWD6Q4V339 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
CBWD6Q4V339 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CBWD6Q4V339 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
CBWD6Q4V339 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CBWD6Q4V339 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CBWD6Q4V339 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.38■■□□□ 1.49
CBWD6Q4V339 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.38■■□□□ 1.49
CBWD6Q4V339 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.38■■□□□ 1.49
CBWD6Q4V339 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CBWD6Q4V339 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CBWD6Q4V339 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.37■■□□□ 1.49
CBWD6Q4V339 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.37■■□□□ 1.49
CBWD6Q4V339 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.37■■□□□ 1.49
CBWD6Q4V339 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.37■■□□□ 1.49
CBWD6Q4V339 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CBWD6Q4V339 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.37■■□□□ 1.49
CBWD6Q4V339 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
CBWD6Q4V339 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CBWD6Q4V339 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CBWD6Q4V339 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CBWD6Q4V339 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CBWD6Q4V339 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CBWD6Q4V339 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.36■■□□□ 1.49
CBWD6Q4V339 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CBWD6Q4V339 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
CBWD6Q4V339 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CBWD6Q4V339 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CBWD6Q4V339 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CBWD6Q4V339 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CBWD6Q4V339 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.35■■□□□ 1.49
CBWD6Q4V339 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.35■■□□□ 1.49
CBWD6Q4V339 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CBWD6Q4V339 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CBWD6Q4V339 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CBWD6Q4V339 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CBWD6Q4V339 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CBWD6Q4V339 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.34■■□□□ 1.49
CBWD6Q4V339 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CBWD6Q4V339 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CBWD6Q4V339 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CBWD6Q4V339 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CBWD6Q4V339 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.34■■□□□ 1.49
CBWD6Q4V339 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CBWD6Q4V339 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CBWD6Q4V339 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.34■■□□□ 1.49
CBWD6Q4V339 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CBWD6Q4V339 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CBWD6Q4V339 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
CBWD6Q4V339 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.33■■□□□ 1.49
CBWD6Q4V339 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CBWD6Q4V339 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.33■■□□□ 1.49
CBWD6Q4V339 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.33■■□□□ 1.49
CBWD6Q4V339 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CBWD6Q4V339 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.33■■□□□ 1.48
CBWD6Q4V339 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CBWD6Q4V339 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
CBWD6Q4V339 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CBWD6Q4V339 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CBWD6Q4V339 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CBWD6Q4V339 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.32■■□□□ 1.48
CBWD6Q4V339 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CBWD6Q4V339 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CBWD6Q4V339 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.32■■□□□ 1.48
CBWD6Q4V339 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.32■■□□□ 1.48
CBWD6Q4V339 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CBWD6Q4V339 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CBWD6Q4V339 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CBWD6Q4V339 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CBWD6Q4V339 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CBWD6Q4V339 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.32■■□□□ 1.48
CBWD6Q4V339 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CBWD6Q4V339 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.31■■□□□ 1.48
CBWD6Q4V339 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CBWD6Q4V339 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CBWD6Q4V339 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.31■■□□□ 1.48
CBWD6Q4V339 AL353803.4-201ENST00000565882 1934 ntBASIC24.31■■□□□ 1.48
CBWD6Q4V339 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CBWD6Q4V339 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CBWD6Q4V339 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CBWD6Q4V339 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CBWD6Q4V339 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.3■■□□□ 1.48
CBWD6Q4V339 KRT16P3-201ENST00000439127 1283 ntBASIC24.3■■□□□ 1.48
CBWD6Q4V339 MIR6724-1-201ENST00000616420 92 ntBASIC24.3■■□□□ 1.48
CBWD6Q4V339 MIR6724-2-201ENST00000616483 92 ntBASIC24.3■■□□□ 1.48
CBWD6Q4V339 MIR6724-4-201ENST00000617390 92 ntBASIC24.3■■□□□ 1.48
CBWD6Q4V339 MIR6724-3-201ENST00000622482 92 ntBASIC24.3■■□□□ 1.48
CBWD6Q4V339 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.3■■□□□ 1.48
CBWD6Q4V339 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms