Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL20P78556 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.73■□□□□ 0.43
CCL20P78556 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCL20P78556 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCL20P78556 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL20P78556 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL20P78556 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL20P78556 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCL20P78556 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCL20P78556 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL20P78556 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL20P78556 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL20P78556 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL20P78556 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL20P78556 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCL20P78556 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CCL20P78556 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL20P78556 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.71■□□□□ 0.43
CCL20P78556 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL20P78556 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.71■□□□□ 0.43
CCL20P78556 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL20P78556 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCL20P78556 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL20P78556 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL20P78556 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCL20P78556 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.71■□□□□ 0.43
CCL20P78556 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.71■□□□□ 0.43
CCL20P78556 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.71■□□□□ 0.43
CCL20P78556 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.71■□□□□ 0.42
CCL20P78556 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCL20P78556 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCL20P78556 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL20P78556 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL20P78556 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.7■□□□□ 0.42
CCL20P78556 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL20P78556 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL20P78556 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL20P78556 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.7■□□□□ 0.42
CCL20P78556 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL20P78556 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL20P78556 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL20P78556 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.7■□□□□ 0.42
CCL20P78556 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCL20P78556 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL20P78556 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.7■□□□□ 0.42
CCL20P78556 AL161729.1-201ENST00000604104 1402 ntBASIC17.7■□□□□ 0.42
CCL20P78556 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL20P78556 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL20P78556 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CCL20P78556 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCL20P78556 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.7■□□□□ 0.42
CCL20P78556 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL20P78556 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.69■□□□□ 0.42
CCL20P78556 RNF165-205ENST00000588679 2904 ntBASIC17.69■□□□□ 0.42
CCL20P78556 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL20P78556 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.69■□□□□ 0.42
CCL20P78556 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL20P78556 DUX4L29-201ENST00000425409 679 ntBASIC17.69■□□□□ 0.42
CCL20P78556 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.69■□□□□ 0.42
CCL20P78556 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.69■□□□□ 0.42
CCL20P78556 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL20P78556 AC079630.1-202ENST00000618127 1840 ntBASIC17.69■□□□□ 0.42
CCL20P78556 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCL20P78556 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCL20P78556 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCL20P78556 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL20P78556 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL20P78556 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL20P78556 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL20P78556 AC005229.4-201ENST00000610085 2198 ntBASIC17.69■□□□□ 0.42
CCL20P78556 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCL20P78556 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCL20P78556 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL20P78556 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCL20P78556 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL20P78556 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.68■□□□□ 0.42
CCL20P78556 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL20P78556 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.68■□□□□ 0.42
CCL20P78556 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.68■□□□□ 0.42
CCL20P78556 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL20P78556 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCL20P78556 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL20P78556 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCL20P78556 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.67■□□□□ 0.42
CCL20P78556 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL20P78556 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CCL20P78556 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCL20P78556 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCL20P78556 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL20P78556 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCL20P78556 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.67■□□□□ 0.42
CCL20P78556 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.67■□□□□ 0.42
CCL20P78556 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL20P78556 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCL20P78556 AC080038.3-201ENST00000623346 1952 ntBASIC17.66■□□□□ 0.42
CCL20P78556 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL20P78556 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL20P78556 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.66■□□□□ 0.42
CCL20P78556 DUX4L13-201ENST00000554103 1267 ntBASIC17.66■□□□□ 0.42
CCL20P78556 DUX4L15-201ENST00000611059 1267 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms