Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRKDCP78527 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.61■□□□□ 0.25
PRKDCP78527 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRKDCP78527 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.61■□□□□ 0.25
PRKDCP78527 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PRKDCP78527 AP004609.3-201ENST00000610705 1884 ntBASIC16.61■□□□□ 0.25
PRKDCP78527 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.61■□□□□ 0.25
PRKDCP78527 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRKDCP78527 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRKDCP78527 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRKDCP78527 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRKDCP78527 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PRKDCP78527 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRKDCP78527 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.6■□□□□ 0.25
PRKDCP78527 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRKDCP78527 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRKDCP78527 ITM2C-210ENST00000620962 501 ntBASIC16.6■□□□□ 0.25
PRKDCP78527 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRKDCP78527 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
PRKDCP78527 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRKDCP78527 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.6■□□□□ 0.25
PRKDCP78527 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.6■□□□□ 0.25
PRKDCP78527 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.6■□□□□ 0.25
PRKDCP78527 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PRKDCP78527 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRKDCP78527 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRKDCP78527 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.59■□□□□ 0.25
PRKDCP78527 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.59■□□□□ 0.25
PRKDCP78527 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.59■□□□□ 0.25
PRKDCP78527 AC092118.2-201ENST00000613495 667 ntBASIC16.59■□□□□ 0.25
PRKDCP78527 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRKDCP78527 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.59■□□□□ 0.25
PRKDCP78527 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PRKDCP78527 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.59■□□□□ 0.25
PRKDCP78527 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.59■□□□□ 0.25
PRKDCP78527 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PRKDCP78527 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC16.58■□□□□ 0.25
PRKDCP78527 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PRKDCP78527 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRKDCP78527 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRKDCP78527 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRKDCP78527 POU5F1P3-201ENST00000428824 1078 ntBASIC16.58■□□□□ 0.24
PRKDCP78527 KRT18P11-201ENST00000435214 1283 ntBASIC16.58■□□□□ 0.24
PRKDCP78527 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PRKDCP78527 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PRKDCP78527 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.58■□□□□ 0.24
PRKDCP78527 LINC02228-203ENST00000641970 1355 ntBASIC16.57■□□□□ 0.24
PRKDCP78527 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PRKDCP78527 AC009086.3-201ENST00000623486 1008 ntBASIC16.57■□□□□ 0.24
PRKDCP78527 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKDCP78527 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKDCP78527 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.57■□□□□ 0.24
PRKDCP78527 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRKDCP78527 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRKDCP78527 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKDCP78527 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.57■□□□□ 0.24
PRKDCP78527 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
PRKDCP78527 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKDCP78527 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRKDCP78527 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.57■□□□□ 0.24
PRKDCP78527 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRKDCP78527 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.57■□□□□ 0.24
PRKDCP78527 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC16.57■□□□□ 0.24
PRKDCP78527 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKDCP78527 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC16.56■□□□□ 0.24
PRKDCP78527 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.56■□□□□ 0.24
PRKDCP78527 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PRKDCP78527 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRKDCP78527 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PRKDCP78527 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.56■□□□□ 0.24
PRKDCP78527 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.56■□□□□ 0.24
PRKDCP78527 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRKDCP78527 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PRKDCP78527 AC139426.1-201ENST00000568218 2529 ntBASIC16.56■□□□□ 0.24
PRKDCP78527 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PRKDCP78527 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRKDCP78527 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRKDCP78527 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRKDCP78527 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRKDCP78527 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRKDCP78527 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKDCP78527 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PRKDCP78527 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKDCP78527 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRKDCP78527 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRKDCP78527 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKDCP78527 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.55■□□□□ 0.24
PRKDCP78527 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRKDCP78527 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.55■□□□□ 0.24
PRKDCP78527 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.55■□□□□ 0.24
PRKDCP78527 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRKDCP78527 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.55■□□□□ 0.24
PRKDCP78527 SLC7A5P1-201ENST00000568957 537 ntBASIC16.55■□□□□ 0.24
PRKDCP78527 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKDCP78527 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.55■□□□□ 0.24
PRKDCP78527 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PRKDCP78527 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRKDCP78527 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.54■□□□□ 0.24
PRKDCP78527 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRKDCP78527 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms