Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.7■□□□□ 0.74
NKX6-1P78426 DUX4L19-201ENST00000557448 1267 ntBASIC19.7■□□□□ 0.74
NKX6-1P78426 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.7■□□□□ 0.74
NKX6-1P78426 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.7■□□□□ 0.74
NKX6-1P78426 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NKX6-1P78426 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-1P78426 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-1P78426 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.7■□□□□ 0.74
NKX6-1P78426 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-1P78426 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-1P78426 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-1P78426 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-1P78426 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
NKX6-1P78426 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-1P78426 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-1P78426 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-1P78426 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.69■□□□□ 0.74
NKX6-1P78426 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-1P78426 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.69■□□□□ 0.74
NKX6-1P78426 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-1P78426 MIR6821-201ENST00000617625 74 ntBASIC19.69■□□□□ 0.74
NKX6-1P78426 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-1P78426 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-1P78426 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-1P78426 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX6-1P78426 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.69■□□□□ 0.74
NKX6-1P78426 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NKX6-1P78426 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX6-1P78426 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX6-1P78426 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX6-1P78426 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX6-1P78426 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX6-1P78426 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX6-1P78426 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX6-1P78426 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NKX6-1P78426 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX6-1P78426 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.68■□□□□ 0.74
NKX6-1P78426 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.68■□□□□ 0.74
NKX6-1P78426 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX6-1P78426 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX6-1P78426 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NKX6-1P78426 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NKX6-1P78426 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX6-1P78426 MIR939-201ENST00000401314 82 ntBASIC19.67■□□□□ 0.74
NKX6-1P78426 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NKX6-1P78426 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NKX6-1P78426 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX6-1P78426 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX6-1P78426 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX6-1P78426 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.67■□□□□ 0.74
NKX6-1P78426 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NKX6-1P78426 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX6-1P78426 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NKX6-1P78426 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NKX6-1P78426 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NKX6-1P78426 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.66■□□□□ 0.74
NKX6-1P78426 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.66■□□□□ 0.74
NKX6-1P78426 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKX6-1P78426 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.66■□□□□ 0.74
NKX6-1P78426 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NKX6-1P78426 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX6-1P78426 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKX6-1P78426 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX6-1P78426 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX6-1P78426 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NKX6-1P78426 AC097381.1-201ENST00000429019 1296 ntBASIC19.65■□□□□ 0.74
NKX6-1P78426 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.65■□□□□ 0.74
NKX6-1P78426 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.65■□□□□ 0.74
NKX6-1P78426 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.65■□□□□ 0.74
NKX6-1P78426 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX6-1P78426 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX6-1P78426 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.65■□□□□ 0.74
NKX6-1P78426 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX6-1P78426 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NKX6-1P78426 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NKX6-1P78426 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NKX6-1P78426 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX6-1P78426 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.64■□□□□ 0.73
NKX6-1P78426 AC091305.1-201ENST00000479476 895 ntBASIC19.64■□□□□ 0.73
NKX6-1P78426 AP001330.3-201ENST00000520123 633 ntBASIC19.64■□□□□ 0.73
NKX6-1P78426 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX6-1P78426 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX6-1P78426 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX6-1P78426 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX6-1P78426 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX6-1P78426 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.63■□□□□ 0.73
NKX6-1P78426 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.63■□□□□ 0.73
NKX6-1P78426 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX6-1P78426 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX6-1P78426 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NKX6-1P78426 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX6-1P78426 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX6-1P78426 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
NKX6-1P78426 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.63■□□□□ 0.73
NKX6-1P78426 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.63■□□□□ 0.73
NKX6-1P78426 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NKX6-1P78426 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.63■□□□□ 0.73
NKX6-1P78426 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX6-1P78426 AL139125.2-201ENST00000623134 1869 ntBASIC19.62■□□□□ 0.73
NKX6-1P78426 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms