Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HIST1H3AP68431 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HIST1H3AP68431 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H3AP68431 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H3AP68431 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H3AP68431 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
HIST1H3AP68431 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.67■□□□□ 0.74
HIST1H3AP68431 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H3AP68431 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H3AP68431 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
HIST1H3AP68431 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H3AP68431 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H3AP68431 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H3AP68431 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H3AP68431 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H3AP68431 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H3AP68431 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H3AP68431 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.66■□□□□ 0.74
HIST1H3AP68431 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H3AP68431 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HIST1H3AP68431 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H3AP68431 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H3AP68431 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST1H3AP68431 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HIST1H3AP68431 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST1H3AP68431 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST1H3AP68431 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H3AP68431 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H3AP68431 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HIST1H3AP68431 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H3AP68431 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H3AP68431 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H3AP68431 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.66■□□□□ 0.74
HIST1H3AP68431 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H3AP68431 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST1H3AP68431 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H3AP68431 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST1H3AP68431 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.65■□□□□ 0.74
HIST1H3AP68431 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HIST1H3AP68431 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
HIST1H3AP68431 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HIST1H3AP68431 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIST1H3AP68431 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.74
HIST1H3AP68431 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.64■□□□□ 0.74
HIST1H3AP68431 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HIST1H3AP68431 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIST1H3AP68431 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
HIST1H3AP68431 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HIST1H3AP68431 MTDHP2-201ENST00000601468 714 ntBASIC19.64■□□□□ 0.73
HIST1H3AP68431 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.64■□□□□ 0.73
HIST1H3AP68431 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIST1H3AP68431 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIST1H3AP68431 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HIST1H3AP68431 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.64■□□□□ 0.73
HIST1H3AP68431 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.64■□□□□ 0.73
HIST1H3AP68431 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H3AP68431 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H3AP68431 C9orf163-202ENST00000624034 2573 ntBASIC19.63■□□□□ 0.73
HIST1H3AP68431 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.63■□□□□ 0.73
HIST1H3AP68431 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.63■□□□□ 0.73
HIST1H3AP68431 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.63■□□□□ 0.73
HIST1H3AP68431 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H3AP68431 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H3AP68431 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H3AP68431 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.63■□□□□ 0.73
HIST1H3AP68431 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.63■□□□□ 0.73
HIST1H3AP68431 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HIST1H3AP68431 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H3AP68431 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H3AP68431 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.62■□□□□ 0.73
HIST1H3AP68431 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H3AP68431 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.62■□□□□ 0.73
HIST1H3AP68431 AC010997.5-201ENST00000609182 354 ntBASIC19.62■□□□□ 0.73
HIST1H3AP68431 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H3AP68431 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HIST1H3AP68431 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HIST1H3AP68431 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.62■□□□□ 0.73
HIST1H3AP68431 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.62■□□□□ 0.73
HIST1H3AP68431 AC133561.1-201ENST00000568600 2415 ntBASIC19.62■□□□□ 0.73
HIST1H3AP68431 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.62■□□□□ 0.73
HIST1H3AP68431 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HIST1H3AP68431 AC144652.1-201ENST00000609974 1624 ntBASIC19.62■□□□□ 0.73
HIST1H3AP68431 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HIST1H3AP68431 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HIST1H3AP68431 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.61■□□□□ 0.73
HIST1H3AP68431 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIST1H3AP68431 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.61■□□□□ 0.73
HIST1H3AP68431 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIST1H3AP68431 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HIST1H3AP68431 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HIST1H3AP68431 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HIST1H3AP68431 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.6■□□□□ 0.73
HIST1H3AP68431 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HIST1H3AP68431 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.6■□□□□ 0.73
HIST1H3AP68431 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.6■□□□□ 0.73
HIST1H3AP68431 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
HIST1H3AP68431 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.59■□□□□ 0.73
HIST1H3AP68431 AL353803.4-201ENST00000565882 1934 ntBASIC19.59■□□□□ 0.73
HIST1H3AP68431 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H3AP68431 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms