Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.77■□□□□ 0.76
LSM6P62312 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSM6P62312 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.77■□□□□ 0.76
LSM6P62312 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.77■□□□□ 0.76
LSM6P62312 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LSM6P62312 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LSM6P62312 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSM6P62312 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSM6P62312 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LSM6P62312 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSM6P62312 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.77■□□□□ 0.75
LSM6P62312 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LSM6P62312 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LSM6P62312 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LSM6P62312 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
LSM6P62312 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LSM6P62312 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM6P62312 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.76■□□□□ 0.75
LSM6P62312 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.76■□□□□ 0.75
LSM6P62312 MTDHP2-201ENST00000601468 714 ntBASIC19.76■□□□□ 0.75
LSM6P62312 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.76■□□□□ 0.75
LSM6P62312 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LSM6P62312 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM6P62312 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM6P62312 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM6P62312 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM6P62312 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LSM6P62312 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
LSM6P62312 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.75■□□□□ 0.75
LSM6P62312 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM6P62312 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM6P62312 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSM6P62312 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSM6P62312 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSM6P62312 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LSM6P62312 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.74■□□□□ 0.75
LSM6P62312 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LSM6P62312 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LSM6P62312 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LSM6P62312 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LSM6P62312 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
LSM6P62312 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LSM6P62312 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSM6P62312 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.73■□□□□ 0.75
LSM6P62312 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.73■□□□□ 0.75
LSM6P62312 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.73■□□□□ 0.75
LSM6P62312 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSM6P62312 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSM6P62312 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.73■□□□□ 0.75
LSM6P62312 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSM6P62312 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.72■□□□□ 0.75
LSM6P62312 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSM6P62312 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSM6P62312 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSM6P62312 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LSM6P62312 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.72■□□□□ 0.75
LSM6P62312 AC010997.5-201ENST00000609182 354 ntBASIC19.72■□□□□ 0.75
LSM6P62312 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LSM6P62312 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSM6P62312 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.72■□□□□ 0.75
LSM6P62312 AC144652.1-201ENST00000609974 1624 ntBASIC19.72■□□□□ 0.75
LSM6P62312 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSM6P62312 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.72■□□□□ 0.75
LSM6P62312 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSM6P62312 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.72■□□□□ 0.75
LSM6P62312 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSM6P62312 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSM6P62312 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSM6P62312 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSM6P62312 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LSM6P62312 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.71■□□□□ 0.75
LSM6P62312 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.71■□□□□ 0.75
LSM6P62312 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LSM6P62312 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSM6P62312 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.7■□□□□ 0.74
LSM6P62312 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
LSM6P62312 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LSM6P62312 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSM6P62312 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSM6P62312 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSM6P62312 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSM6P62312 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSM6P62312 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.7■□□□□ 0.74
LSM6P62312 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LSM6P62312 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.7■□□□□ 0.74
LSM6P62312 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM6P62312 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LSM6P62312 AC133561.1-201ENST00000568600 2415 ntBASIC19.69■□□□□ 0.74
LSM6P62312 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM6P62312 C9orf163-202ENST00000624034 2573 ntBASIC19.69■□□□□ 0.74
LSM6P62312 AL353803.4-201ENST00000565882 1934 ntBASIC19.68■□□□□ 0.74
LSM6P62312 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LSM6P62312 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM6P62312 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM6P62312 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.68■□□□□ 0.74
LSM6P62312 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.68■□□□□ 0.74
LSM6P62312 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM6P62312 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM6P62312 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LSM6P62312 FP325331.1-202ENST00000623531 1380 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms