Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP1B3P54709 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP1B3P54709 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.42■□□□□ 0.7
ATP1B3P54709 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP1B3P54709 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP1B3P54709 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP1B3P54709 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ATP1B3P54709 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP1B3P54709 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP1B3P54709 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP1B3P54709 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP1B3P54709 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP1B3P54709 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP1B3P54709 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP1B3P54709 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP1B3P54709 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP1B3P54709 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP1B3P54709 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP1B3P54709 AF131216.4-201ENST00000638924 1588 ntBASIC19.41■□□□□ 0.7
ATP1B3P54709 EP400NL-214ENST00000641289 2402 ntBASIC19.41■□□□□ 0.7
ATP1B3P54709 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP1B3P54709 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP1B3P54709 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP1B3P54709 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
ATP1B3P54709 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP1B3P54709 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP1B3P54709 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
ATP1B3P54709 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP1B3P54709 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP1B3P54709 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP1B3P54709 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ATP1B3P54709 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ATP1B3P54709 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP1B3P54709 MIR4508-201ENST00000584178 70 ntBASIC19.4■□□□□ 0.7
ATP1B3P54709 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP1B3P54709 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.4■□□□□ 0.7
ATP1B3P54709 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP1B3P54709 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP1B3P54709 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ATP1B3P54709 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP1B3P54709 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP1B3P54709 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP1B3P54709 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ATP1B3P54709 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP1B3P54709 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP1B3P54709 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP1B3P54709 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP1B3P54709 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP1B3P54709 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.39■□□□□ 0.69
ATP1B3P54709 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP1B3P54709 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.39■□□□□ 0.69
ATP1B3P54709 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.39■□□□□ 0.69
ATP1B3P54709 AL033527.3-201ENST00000566366 1196 ntBASIC19.39■□□□□ 0.69
ATP1B3P54709 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ATP1B3P54709 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP1B3P54709 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP1B3P54709 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP1B3P54709 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP1B3P54709 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP1B3P54709 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP1B3P54709 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP1B3P54709 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP1B3P54709 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP1B3P54709 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP1B3P54709 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP1B3P54709 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ATP1B3P54709 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.38■□□□□ 0.69
ATP1B3P54709 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.38■□□□□ 0.69
ATP1B3P54709 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.38■□□□□ 0.69
ATP1B3P54709 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.38■□□□□ 0.69
ATP1B3P54709 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP1B3P54709 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATP1B3P54709 DUSP8P3-201ENST00000399571 1760 ntBASIC19.37■□□□□ 0.69
ATP1B3P54709 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP1B3P54709 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP1B3P54709 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.37■□□□□ 0.69
ATP1B3P54709 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP1B3P54709 AC004448.1-201ENST00000458332 883 ntBASIC19.37■□□□□ 0.69
ATP1B3P54709 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ATP1B3P54709 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP1B3P54709 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ATP1B3P54709 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP1B3P54709 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP1B3P54709 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP1B3P54709 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP1B3P54709 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP1B3P54709 YBX1P4-201ENST00000392794 808 ntBASIC19.36■□□□□ 0.69
ATP1B3P54709 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ATP1B3P54709 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.36■□□□□ 0.69
ATP1B3P54709 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP1B3P54709 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP1B3P54709 AC233723.2-201ENST00000623798 2106 ntBASIC19.36■□□□□ 0.69
ATP1B3P54709 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP1B3P54709 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP1B3P54709 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP1B3P54709 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP1B3P54709 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP1B3P54709 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP1B3P54709 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
ATP1B3P54709 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms