Protein–RNA interactions for Protein: P49954

NIT3, Omega-amidase NIT3, yeast

Predictions only

Length 291 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
NIT3	P49954	YKL177W	YKL177W	339 nt		5.35	□□□□□ -1.55
NIT3	P49954	YLR339C	YLR339C	552 nt		5.35	□□□□□ -1.55
NIT3	P49954	NRM1	YNR009W	750 nt		5.35	□□□□□ -1.55
NIT3	P49954	BUD17	YNR027W	954 nt		5.35	□□□□□ -1.55
NIT3	P49954	YOL106W	YOL106W	354 nt		5.35	□□□□□ -1.55
NIT3	P49954	CNS1	YBR155W	1158 nt		5.35	□□□□□ -1.55
NIT3	P49954	MNN5	YJL186W	1761 nt		5.34	□□□□□ -1.55
NIT3	P49954	CTS2	YDR371W	1536 nt		5.34	□□□□□ -1.55
NIT3	P49954	YDL218W	YDL218W	954 nt		5.34	□□□□□ -1.55
NIT3	P49954	YDR029W	YDR029W	315 nt		5.34	□□□□□ -1.55
NIT3	P49954	PEF1	YGR058W	1008 nt		5.34	□□□□□ -1.55
NIT3	P49954	EFM4	YIL064W	774 nt		5.34	□□□□□ -1.55
NIT3	P49954	YOL163W	YOL163W	510 nt		5.34	□□□□□ -1.55
NIT3	P49954	YPL068C	YPL068C	882 nt		5.34	□□□□□ -1.55
NIT3	P49954	CMR3	YPR013C	954 nt		5.34	□□□□□ -1.55
NIT3	P49954	ICS2	YBR157C	768 nt		5.34	□□□□□ -1.55
NIT3	P49954	YBR219C	YBR219C	384 nt		5.34	□□□□□ -1.55
NIT3	P49954	CYK3	YDL117W	2658 nt		5.34	□□□□□ -1.55
NIT3	P49954	EUG1	YDR518W	1554 nt		5.33	□□□□□ -1.56
NIT3	P49954	GAS3	YMR215W	1575 nt		5.33	□□□□□ -1.56
NIT3	P49954	GAS5	YOL030W	1455 nt		5.33	□□□□□ -1.56
NIT3	P49954	WHI2	YOR043W	1461 nt		5.33	□□□□□ -1.56
NIT3	P49954	VPS4	YPR173C	1314 nt		5.33	□□□□□ -1.56
NIT3	P49954	ATP16	YDL004W	483 nt		5.33	□□□□□ -1.56
NIT3	P49954	VMA7	YGR020C	357 nt		5.33	□□□□□ -1.56
NIT3	P49954	HIS6	YIL020C	786 nt		5.33	□□□□□ -1.56
NIT3	P49954	GAT3	YLR013W	426 nt		5.33	□□□□□ -1.56
NIT3	P49954	SEC72	YLR292C	582 nt		5.33	□□□□□ -1.56
NIT3	P49954	HUA2	YOR284W	732 nt		5.33	□□□□□ -1.56
NIT3	P49954	DBF4	YDR052C	2115 nt		5.33	□□□□□ -1.56
NIT3	P49954	MID1	YNL291C	1647 nt		5.33	□□□□□ -1.56
NIT3	P49954	MEC3	YLR288C	1425 nt		5.32	□□□□□ -1.56
NIT3	P49954	PIF1	YML061C	2580 nt		5.32	□□□□□ -1.56
NIT3	P49954	NUD1	YOR373W	2556 nt		5.32	□□□□□ -1.56
NIT3	P49954	RPL7A	YGL076C	735 nt		5.32	□□□□□ -1.56
NIT3	P49954	DOT5	YIL010W	648 nt		5.32	□□□□□ -1.56
NIT3	P49954	LDS1	YAL018C	978 nt		5.32	□□□□□ -1.56
NIT3	P49954	VPS25	YJR102C	609 nt		5.32	□□□□□ -1.56
NIT3	P49954	QRI5	YLR204W	336 nt		5.32	□□□□□ -1.56
NIT3	P49954	ERD2	YBL040C	660 nt		5.32	□□□□□ -1.56
NIT3	P49954	YNL285W	YNL285W	372 nt		5.32	□□□□□ -1.56
NIT3	P49954	RPL7B	YPL198W	735 nt		5.32	□□□□□ -1.56
NIT3	P49954	ARA1	YBR149W	1035 nt		5.32	□□□□□ -1.56
NIT3	P49954	UMP1	YBR173C	447 nt		5.32	□□□□□ -1.56
NIT3	P49954	RRP7	YCL031C	894 nt		5.32	□□□□□ -1.56
NIT3	P49954	GSY2	YLR258W	2118 nt		5.32	□□□□□ -1.56
NIT3	P49954	EXO1	YOR033C	2109 nt		5.32	□□□□□ -1.56
NIT3	P49954	ICL1	YER065C	1674 nt		5.31	□□□□□ -1.56
NIT3	P49954	KKQ8	YKL168C	2175 nt		5.31	□□□□□ -1.56
NIT3	P49954	YLL067C	YLL067C	3618 nt		5.31	□□□□□ -1.56
NIT3	P49954	RDI1	YDL135C	609 nt		5.31	□□□□□ -1.56
NIT3	P49954	RPT3	YDR394W	1287 nt		5.31	□□□□□ -1.56
NIT3	P49954	GLE2	YER107C	1098 nt		5.31	□□□□□ -1.56
NIT3	P49954	TYS1	YGR185C	1185 nt		5.31	□□□□□ -1.56
NIT3	P49954	tR(ACG)D	tR(ACG)D	73 nt		5.31	□□□□□ -1.56
NIT3	P49954	tR(ACG)E	tR(ACG)E	73 nt		5.31	□□□□□ -1.56
NIT3	P49954	tR(ACG)K	tR(ACG)K	73 nt		5.31	□□□□□ -1.56
NIT3	P49954	tR(ACG)L	tR(ACG)L	73 nt		5.31	□□□□□ -1.56
NIT3	P49954	tR(ACG)O	tR(ACG)O	73 nt		5.31	□□□□□ -1.56
NIT3	P49954	EPS1	YIL005W	2106 nt		5.31	□□□□□ -1.56
NIT3	P49954	RPE1	YJL121C	717 nt		5.31	□□□□□ -1.56
NIT3	P49954	YKL223W	YKL223W	333 nt		5.31	□□□□□ -1.56
NIT3	P49954	TPP1	YMR156C	717 nt		5.31	□□□□□ -1.56
NIT3	P49954	ROT1	YMR200W	771 nt		5.31	□□□□□ -1.56
NIT3	P49954	YNL320W	YNL320W	855 nt		5.31	□□□□□ -1.56
NIT3	P49954	TYE7	YOR344C	876 nt		5.31	□□□□□ -1.56
NIT3	P49954	YBR056W-A	YBR056W-A	201 nt		5.31	□□□□□ -1.56
NIT3	P49954	RPS9B	YBR189W	588 nt		5.31	□□□□□ -1.56
NIT3	P49954	POP4	YBR257W	840 nt		5.31	□□□□□ -1.56
NIT3	P49954	YTM1	YOR272W	1383 nt		5.3	□□□□□ -1.56
NIT3	P49954	MCX1	YBR227C	1563 nt		5.3	□□□□□ -1.56
NIT3	P49954	MNN2	YBR015C	1794 nt		5.3	□□□□□ -1.56
NIT3	P49954	YLL037W	YLL037W	381 nt		5.3	□□□□□ -1.56
NIT3	P49954	TFS1	YLR178C	660 nt		5.3	□□□□□ -1.56
NIT3	P49954	YLR202C	YLR202C	327 nt		5.3	□□□□□ -1.56
NIT3	P49954	VMA6	YLR447C	1038 nt		5.3	□□□□□ -1.56
NIT3	P49954	IRC13	YOR235W	315 nt		5.3	□□□□□ -1.56
NIT3	P49954	GLN1	YPR035W	1113 nt		5.3	□□□□□ -1.56
NIT3	P49954	YBR116C	YBR116C	528 nt		5.3	□□□□□ -1.56
NIT3	P49954	KEX2	YNL238W	2445 nt		5.3	□□□□□ -1.56
NIT3	P49954	HRP1	YOL123W	1605 nt		5.3	□□□□□ -1.56
NIT3	P49954	IMA3	YIL172C	1770 nt		5.29	□□□□□ -1.56
NIT3	P49954	IMA4	YJL221C	1770 nt		5.29	□□□□□ -1.56
NIT3	P49954	SOG2	YOR353C	2376 nt		5.29	□□□□□ -1.56
NIT3	P49954	FRS2	YFL022C	1512 nt		5.29	□□□□□ -1.56
NIT3	P49954	OCT1	YKL134C	2319 nt		5.29	□□□□□ -1.56
NIT3	P49954	RSM27	YGR215W	333 nt		5.29	□□□□□ -1.56
NIT3	P49954	BCY1	YIL033C	1251 nt		5.29	□□□□□ -1.56
NIT3	P49954	YJL068C	YJL068C	900 nt		5.29	□□□□□ -1.56
NIT3	P49954	MOG1	YJR074W	657 nt		5.29	□□□□□ -1.56
NIT3	P49954	PDR16	YNL231C	1056 nt		5.29	□□□□□ -1.56
NIT3	P49954	CKA2	YOR061W	1020 nt		5.29	□□□□□ -1.56
NIT3	P49954	CLB1	YGR108W	1416 nt		5.29	□□□□□ -1.56
NIT3	P49954	COM2	YER130C	1332 nt		5.28	□□□□□ -1.56
NIT3	P49954	KTR6	YPL053C	1341 nt		5.28	□□□□□ -1.56
NIT3	P49954	OCA4	YCR095C	1089 nt		5.28	□□□□□ -1.56
NIT3	P49954	RPS5	YJR123W	678 nt		5.28	□□□□□ -1.56
NIT3	P49954	UPS2	YLR168C	693 nt		5.28	□□□□□ -1.56
NIT3	P49954	TSA1	YML028W	591 nt		5.28	□□□□□ -1.56
NIT3	P49954	POR1	YNL055C	852 nt		5.28	□□□□□ -1.56

Retrieved 100 of 7,029 protein–RNA pairs in 30.8 ms