Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATRXP46100 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATRXP46100 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.84■□□□□ 0.93
ATRXP46100 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATRXP46100 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.84■□□□□ 0.93
ATRXP46100 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.84■□□□□ 0.93
ATRXP46100 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATRXP46100 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.84■□□□□ 0.93
ATRXP46100 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATRXP46100 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATRXP46100 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.84■□□□□ 0.93
ATRXP46100 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATRXP46100 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATRXP46100 RPS2P4-201ENST00000476944 856 ntBASIC20.83■□□□□ 0.93
ATRXP46100 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.83■□□□□ 0.93
ATRXP46100 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.83■□□□□ 0.93
ATRXP46100 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ATRXP46100 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ATRXP46100 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATRXP46100 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.82■□□□□ 0.92
ATRXP46100 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATRXP46100 AL354811.1-201ENST00000610286 706 ntBASIC20.82■□□□□ 0.92
ATRXP46100 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.82■□□□□ 0.92
ATRXP46100 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.82■□□□□ 0.92
ATRXP46100 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATRXP46100 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.82■□□□□ 0.92
ATRXP46100 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.82■□□□□ 0.92
ATRXP46100 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.82■□□□□ 0.92
ATRXP46100 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.82■□□□□ 0.92
ATRXP46100 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.82■□□□□ 0.92
ATRXP46100 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATRXP46100 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.81■□□□□ 0.92
ATRXP46100 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATRXP46100 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.81■□□□□ 0.92
ATRXP46100 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATRXP46100 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATRXP46100 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.81■□□□□ 0.92
ATRXP46100 AL138781.1-201ENST00000566567 1274 ntBASIC20.81■□□□□ 0.92
ATRXP46100 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.81■□□□□ 0.92
ATRXP46100 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.81■□□□□ 0.92
ATRXP46100 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATRXP46100 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.8■□□□□ 0.92
ATRXP46100 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.8■□□□□ 0.92
ATRXP46100 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATRXP46100 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATRXP46100 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.8■□□□□ 0.92
ATRXP46100 GUSBP6-202ENST00000438529 1198 ntBASIC20.8■□□□□ 0.92
ATRXP46100 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATRXP46100 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.8■□□□□ 0.92
ATRXP46100 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
ATRXP46100 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ATRXP46100 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.8■□□□□ 0.92
ATRXP46100 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATRXP46100 AC211429.1-201ENST00000415277 523 ntBASIC20.8■□□□□ 0.92
ATRXP46100 AC098590.1-201ENST00000468126 897 ntBASIC20.8■□□□□ 0.92
ATRXP46100 AC083906.2-201ENST00000511578 360 ntBASIC20.8■□□□□ 0.92
ATRXP46100 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.8■□□□□ 0.92
ATRXP46100 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATRXP46100 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATRXP46100 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.8■□□□□ 0.92
ATRXP46100 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.8■□□□□ 0.92
ATRXP46100 AC097639.1-201ENST00000565519 1891 ntBASIC20.79■□□□□ 0.92
ATRXP46100 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATRXP46100 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.79■□□□□ 0.92
ATRXP46100 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.79■□□□□ 0.92
ATRXP46100 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.79■□□□□ 0.92
ATRXP46100 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.79■□□□□ 0.92
ATRXP46100 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
ATRXP46100 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.79■□□□□ 0.92
ATRXP46100 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATRXP46100 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATRXP46100 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ATRXP46100 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.78■□□□□ 0.92
ATRXP46100 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.78■□□□□ 0.92
ATRXP46100 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATRXP46100 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.78■□□□□ 0.92
ATRXP46100 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ATRXP46100 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ATRXP46100 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATRXP46100 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ATRXP46100 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
ATRXP46100 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.77■□□□□ 0.92
ATRXP46100 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATRXP46100 ERN1-208ENST00000606895 2068 ntBASIC20.77■□□□□ 0.92
ATRXP46100 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.77■□□□□ 0.92
ATRXP46100 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.77■□□□□ 0.92
ATRXP46100 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ATRXP46100 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.77■□□□□ 0.92
ATRXP46100 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATRXP46100 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATRXP46100 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
ATRXP46100 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATRXP46100 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.77■□□□□ 0.91
ATRXP46100 AP005435.1-201ENST00000529293 1178 ntBASIC20.77■□□□□ 0.91
ATRXP46100 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATRXP46100 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATRXP46100 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.76■□□□□ 0.91
ATRXP46100 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATRXP46100 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATRXP46100 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms