Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 AL451085.2-201ENST00000605085 799 ntBASIC20.68■□□□□ 0.9
HTR3AP46098 LINC00565-201ENST00000562710 2331 ntBASIC20.68■□□□□ 0.9
HTR3AP46098 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HTR3AP46098 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HTR3AP46098 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HTR3AP46098 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.67■□□□□ 0.9
HTR3AP46098 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HTR3AP46098 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.67■□□□□ 0.9
HTR3AP46098 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.67■□□□□ 0.9
HTR3AP46098 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HTR3AP46098 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HTR3AP46098 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.67■□□□□ 0.9
HTR3AP46098 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HTR3AP46098 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HTR3AP46098 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTR3AP46098 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.66■□□□□ 0.9
HTR3AP46098 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTR3AP46098 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTR3AP46098 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTR3AP46098 AC092028.1-203ENST00000608262 953 ntBASIC20.66■□□□□ 0.9
HTR3AP46098 MIR6722-201ENST00000617286 78 ntBASIC20.66■□□□□ 0.9
HTR3AP46098 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.66■□□□□ 0.9
HTR3AP46098 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTR3AP46098 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HTR3AP46098 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.66■□□□□ 0.9
HTR3AP46098 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HTR3AP46098 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTR3AP46098 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTR3AP46098 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.65■□□□□ 0.9
HTR3AP46098 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HTR3AP46098 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HTR3AP46098 AC239859.2-201ENST00000444165 318 ntBASIC20.65■□□□□ 0.9
HTR3AP46098 MIR4787-201ENST00000607364 84 ntBASIC20.65■□□□□ 0.9
HTR3AP46098 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.65■□□□□ 0.9
HTR3AP46098 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.65■□□□□ 0.9
HTR3AP46098 C9orf163-202ENST00000624034 2573 ntBASIC20.65■□□□□ 0.9
HTR3AP46098 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
HTR3AP46098 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HTR3AP46098 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.64■□□□□ 0.89
HTR3AP46098 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.64■□□□□ 0.89
HTR3AP46098 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HTR3AP46098 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HTR3AP46098 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.64■□□□□ 0.89
HTR3AP46098 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HTR3AP46098 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HTR3AP46098 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.64■□□□□ 0.89
HTR3AP46098 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.64■□□□□ 0.89
HTR3AP46098 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HTR3AP46098 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HTR3AP46098 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.64■□□□□ 0.89
HTR3AP46098 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HTR3AP46098 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.63■□□□□ 0.89
HTR3AP46098 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.63■□□□□ 0.89
HTR3AP46098 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.63■□□□□ 0.89
HTR3AP46098 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HTR3AP46098 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HTR3AP46098 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HTR3AP46098 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.63■□□□□ 0.89
HTR3AP46098 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.63■□□□□ 0.89
HTR3AP46098 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HTR3AP46098 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.63■□□□□ 0.89
HTR3AP46098 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HTR3AP46098 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HTR3AP46098 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HTR3AP46098 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HTR3AP46098 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HTR3AP46098 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HTR3AP46098 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HTR3AP46098 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HTR3AP46098 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HTR3AP46098 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HTR3AP46098 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.62■□□□□ 0.89
HTR3AP46098 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
HTR3AP46098 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.62■□□□□ 0.89
HTR3AP46098 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HTR3AP46098 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.62■□□□□ 0.89
HTR3AP46098 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.62■□□□□ 0.89
HTR3AP46098 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HTR3AP46098 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HTR3AP46098 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HTR3AP46098 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTR3AP46098 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTR3AP46098 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HTR3AP46098 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HTR3AP46098 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
HTR3AP46098 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTR3AP46098 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3AP46098 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.6■□□□□ 0.89
HTR3AP46098 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3AP46098 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.6■□□□□ 0.89
HTR3AP46098 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3AP46098 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HTR3AP46098 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3AP46098 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.6■□□□□ 0.89
HTR3AP46098 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
HTR3AP46098 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.6■□□□□ 0.89
HTR3AP46098 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3AP46098 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.6■□□□□ 0.89
HTR3AP46098 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3AP46098 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms