Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN6P29350 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PTPN6P29350 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN6P29350 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
PTPN6P29350 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.37■■□□□ 1.01
PTPN6P29350 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
PTPN6P29350 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.37■■□□□ 1.01
PTPN6P29350 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN6P29350 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.37■■□□□ 1.01
PTPN6P29350 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.37■■□□□ 1.01
PTPN6P29350 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN6P29350 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN6P29350 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PTPN6P29350 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
PTPN6P29350 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.36■■□□□ 1.01
PTPN6P29350 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.36■■□□□ 1.01
PTPN6P29350 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN6P29350 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN6P29350 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.36■■□□□ 1.01
PTPN6P29350 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PTPN6P29350 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.36■■□□□ 1.01
PTPN6P29350 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN6P29350 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN6P29350 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PTPN6P29350 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN6P29350 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN6P29350 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN6P29350 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN6P29350 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.35■■□□□ 1.01
PTPN6P29350 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.35■■□□□ 1.01
PTPN6P29350 MIR4281-201ENST00000580852 62 ntBASIC21.35■■□□□ 1.01
PTPN6P29350 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.35■■□□□ 1.01
PTPN6P29350 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PTPN6P29350 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.34■■□□□ 1.01
PTPN6P29350 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PTPN6P29350 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN6P29350 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PTPN6P29350 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN6P29350 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN6P29350 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN6P29350 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PTPN6P29350 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
PTPN6P29350 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.34■■□□□ 1.01
PTPN6P29350 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN6P29350 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN6P29350 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN6P29350 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN6P29350 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN6P29350 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PTPN6P29350 Z92544.1-202ENST00000571933 1220 ntBASIC21.33■■□□□ 1.01
PTPN6P29350 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
PTPN6P29350 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
PTPN6P29350 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.33■■□□□ 1
PTPN6P29350 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
PTPN6P29350 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.32■■□□□ 1
PTPN6P29350 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.32■■□□□ 1
PTPN6P29350 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN6P29350 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.32■■□□□ 1
PTPN6P29350 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PTPN6P29350 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.32■■□□□ 1
PTPN6P29350 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.32■■□□□ 1
PTPN6P29350 AC137630.3-201ENST00000607245 391 ntBASIC21.32■■□□□ 1
PTPN6P29350 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN6P29350 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.32■■□□□ 1
PTPN6P29350 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN6P29350 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN6P29350 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN6P29350 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN6P29350 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN6P29350 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.31■■□□□ 1
PTPN6P29350 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.31■■□□□ 1
PTPN6P29350 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.31■■□□□ 1
PTPN6P29350 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN6P29350 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.31■■□□□ 1
PTPN6P29350 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTPN6P29350 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PTPN6P29350 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.3■■□□□ 1
PTPN6P29350 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTPN6P29350 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.3■■□□□ 1
PTPN6P29350 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.3■■□□□ 1
PTPN6P29350 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTPN6P29350 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.3■■□□□ 1
PTPN6P29350 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PTPN6P29350 BX664725.1-201ENST00000438252 379 ntBASIC21.3■■□□□ 1
PTPN6P29350 AC239859.2-201ENST00000444165 318 ntBASIC21.3■■□□□ 1
PTPN6P29350 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.3■■□□□ 1
PTPN6P29350 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.3■■□□□ 1
PTPN6P29350 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.3■■□□□ 1
PTPN6P29350 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.3■■□□□ 1
PTPN6P29350 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.3■■□□□ 1
PTPN6P29350 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTPN6P29350 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTPN6P29350 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.3■■□□□ 1
PTPN6P29350 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.29■■□□□ 1
PTPN6P29350 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PTPN6P29350 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.29■■□□□ 1
PTPN6P29350 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.29■■□□□ 1
PTPN6P29350 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTPN6P29350 AC079630.1-202ENST00000618127 1840 ntBASIC21.29■■□□□ 1
PTPN6P29350 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms