Protein–RNA interactions for Protein: P27815

PDE4A, cAMP-specific 3',5'-cyclic phosphodiesterase 4A, humanhuman

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4AP27815 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PDE4AP27815 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PDE4AP27815 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC28.3■■■□□ 2.12
PDE4AP27815 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC28.29■■■□□ 2.12
PDE4AP27815 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
PDE4AP27815 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDE4AP27815 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC28.29■■■□□ 2.12
PDE4AP27815 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDE4AP27815 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDE4AP27815 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC28.29■■■□□ 2.12
PDE4AP27815 AC010980.1-201ENST00000587192 1142 ntBASIC28.29■■■□□ 2.12
PDE4AP27815 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDE4AP27815 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
PDE4AP27815 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
PDE4AP27815 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDE4AP27815 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PDE4AP27815 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
PDE4AP27815 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PDE4AP27815 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
PDE4AP27815 H19-210ENST00000439725 1929 ntTSL 2 BASIC28.28■■■□□ 2.12
PDE4AP27815 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC28.27■■■□□ 2.12
PDE4AP27815 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC28.27■■■□□ 2.12
PDE4AP27815 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC28.27■■■□□ 2.12
PDE4AP27815 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
PDE4AP27815 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PDE4AP27815 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PDE4AP27815 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC28.27■■■□□ 2.12
PDE4AP27815 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
PDE4AP27815 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC28.27■■■□□ 2.12
PDE4AP27815 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PDE4AP27815 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
PDE4AP27815 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC28.27■■■□□ 2.12
PDE4AP27815 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
PDE4AP27815 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PDE4AP27815 AF131216.4-201ENST00000638924 1588 ntBASIC28.27■■■□□ 2.12
PDE4AP27815 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
PDE4AP27815 EI24-204ENST00000527235 1625 ntTSL 5 BASIC28.26■■■□□ 2.11
PDE4AP27815 AL022069.1-201ENST00000568025 1636 ntBASIC28.26■■■□□ 2.11
PDE4AP27815 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PDE4AP27815 AC022616.5-201ENST00000518796 181 ntBASIC28.26■■■□□ 2.11
PDE4AP27815 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.26■■■□□ 2.11
PDE4AP27815 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PDE4AP27815 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
PDE4AP27815 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PDE4AP27815 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PDE4AP27815 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PDE4AP27815 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC28.25■■■□□ 2.11
PDE4AP27815 TSPY13P-201ENST00000338964 914 ntBASIC28.25■■■□□ 2.11
PDE4AP27815 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PDE4AP27815 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PDE4AP27815 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC28.25■■■□□ 2.11
PDE4AP27815 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
PDE4AP27815 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
PDE4AP27815 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PDE4AP27815 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PDE4AP27815 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
PDE4AP27815 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
PDE4AP27815 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC28.24■■■□□ 2.11
PDE4AP27815 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.24■■■□□ 2.11
PDE4AP27815 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PDE4AP27815 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
PDE4AP27815 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PDE4AP27815 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC28.23■■■□□ 2.11
PDE4AP27815 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PDE4AP27815 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
PDE4AP27815 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
PDE4AP27815 BHLHE23-202ENST00000612929 1109 ntBASIC28.23■■■□□ 2.11
PDE4AP27815 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PDE4AP27815 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
PDE4AP27815 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PDE4AP27815 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
PDE4AP27815 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PDE4AP27815 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PDE4AP27815 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PDE4AP27815 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.22■■■□□ 2.11
PDE4AP27815 AL024507.2-201ENST00000606070 2574 ntBASIC28.22■■■□□ 2.11
PDE4AP27815 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PDE4AP27815 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDE4AP27815 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDE4AP27815 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDE4AP27815 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.21■■■□□ 2.11
PDE4AP27815 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC28.21■■■□□ 2.11
PDE4AP27815 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
PDE4AP27815 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDE4AP27815 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDE4AP27815 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDE4AP27815 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
PDE4AP27815 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PDE4AP27815 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC28.2■■■□□ 2.1
PDE4AP27815 MIR4281-201ENST00000580852 62 ntBASIC28.2■■■□□ 2.1
PDE4AP27815 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC28.2■■■□□ 2.1
PDE4AP27815 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
PDE4AP27815 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
PDE4AP27815 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PDE4AP27815 COMT-203ENST00000403184 2217 ntTSL 2 BASIC28.19■■■□□ 2.1
PDE4AP27815 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
PDE4AP27815 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
PDE4AP27815 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC28.19■■■□□ 2.1
PDE4AP27815 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
PDE4AP27815 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms