Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.42■□□□□ 0.86
GDF1P27539 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GDF1P27539 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.42■□□□□ 0.86
GDF1P27539 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.42■□□□□ 0.86
GDF1P27539 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
GDF1P27539 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GDF1P27539 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GDF1P27539 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GDF1P27539 AC006455.2-201ENST00000429931 906 ntBASIC20.41■□□□□ 0.86
GDF1P27539 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.41■□□□□ 0.86
GDF1P27539 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GDF1P27539 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GDF1P27539 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GDF1P27539 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
GDF1P27539 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GDF1P27539 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GDF1P27539 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GDF1P27539 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.4■□□□□ 0.86
GDF1P27539 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GDF1P27539 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GDF1P27539 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.4■□□□□ 0.86
GDF1P27539 ABCB10P4-201ENST00000566803 2184 ntBASIC20.39■□□□□ 0.86
GDF1P27539 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
GDF1P27539 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
GDF1P27539 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GDF1P27539 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.39■□□□□ 0.85
GDF1P27539 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.39■□□□□ 0.85
GDF1P27539 AC142381.2-201ENST00000566120 298 ntBASIC20.39■□□□□ 0.85
GDF1P27539 AL138724.1-201ENST00000606771 1088 ntBASIC20.39■□□□□ 0.85
GDF1P27539 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
GDF1P27539 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.39■□□□□ 0.85
GDF1P27539 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GDF1P27539 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
GDF1P27539 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GDF1P27539 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GDF1P27539 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
GDF1P27539 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GDF1P27539 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
GDF1P27539 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GDF1P27539 EDA-201ENST00000338901 1233 ntBASIC20.38■□□□□ 0.85
GDF1P27539 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.38■□□□□ 0.85
GDF1P27539 MIR4767-201ENST00000582827 78 ntBASIC20.38■□□□□ 0.85
GDF1P27539 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.38■□□□□ 0.85
GDF1P27539 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.38■□□□□ 0.85
GDF1P27539 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
GDF1P27539 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDF1P27539 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.37■□□□□ 0.85
GDF1P27539 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.37■□□□□ 0.85
GDF1P27539 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GDF1P27539 AC011298.3-201ENST00000615796 283 ntBASIC20.37■□□□□ 0.85
GDF1P27539 AL355001.2-201ENST00000620617 1191 ntBASIC20.37■□□□□ 0.85
GDF1P27539 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GDF1P27539 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
GDF1P27539 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GDF1P27539 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.37■□□□□ 0.85
GDF1P27539 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GDF1P27539 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.36■□□□□ 0.85
GDF1P27539 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
GDF1P27539 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.36■□□□□ 0.85
GDF1P27539 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.36■□□□□ 0.85
GDF1P27539 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
GDF1P27539 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.36■□□□□ 0.85
GDF1P27539 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
GDF1P27539 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.36■□□□□ 0.85
GDF1P27539 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
GDF1P27539 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GDF1P27539 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.36■□□□□ 0.85
GDF1P27539 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.36■□□□□ 0.85
GDF1P27539 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GDF1P27539 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GDF1P27539 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDF1P27539 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GDF1P27539 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GDF1P27539 MIR3181-201ENST00000578512 73 ntBASIC20.35■□□□□ 0.85
GDF1P27539 pRNA.6-201ENST00000610482 90 ntBASIC20.35■□□□□ 0.85
GDF1P27539 pRNA.5-201ENST00000612139 90 ntBASIC20.35■□□□□ 0.85
GDF1P27539 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.35■□□□□ 0.85
GDF1P27539 pRNA.11-201ENST00000618423 90 ntBASIC20.35■□□□□ 0.85
GDF1P27539 pRNA.13-201ENST00000619112 90 ntBASIC20.35■□□□□ 0.85
GDF1P27539 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.35■□□□□ 0.85
GDF1P27539 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDF1P27539 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.34■□□□□ 0.85
GDF1P27539 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.34■□□□□ 0.85
GDF1P27539 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
GDF1P27539 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
GDF1P27539 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
GDF1P27539 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GDF1P27539 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.34■□□□□ 0.85
GDF1P27539 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GDF1P27539 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GDF1P27539 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GDF1P27539 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GDF1P27539 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.33■□□□□ 0.85
GDF1P27539 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
GDF1P27539 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GDF1P27539 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GDF1P27539 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.33■□□□□ 0.85
GDF1P27539 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GDF1P27539 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GDF1P27539 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms