Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 NUP2YLR335W 2163 nt3.62□□□□□ -1.83
CDC39P25655 YHL049CYHL049C 816 nt3.62□□□□□ -1.83
CDC39P25655 FMP46YKR049C 402 nt3.62□□□□□ -1.83
CDC39P25655 ARO10YDR380W 1908 nt3.62□□□□□ -1.83
CDC39P25655 ARN2YHL047C 1863 nt3.61□□□□□ -1.83
CDC39P25655 ARC1YGL105W 1131 nt3.61□□□□□ -1.83
CDC39P25655 YML131WYML131W 1098 nt3.61□□□□□ -1.83
CDC39P25655 HLJ1YMR161W 675 nt3.61□□□□□ -1.83
CDC39P25655 NUP42YDR192C 1293 nt3.61□□□□□ -1.83
CDC39P25655 DSC2YOL073C 969 nt3.61□□□□□ -1.83
CDC39P25655 ENV9YOR246C 993 nt3.61□□□□□ -1.83
CDC39P25655 TGS1YPL157W 948 nt3.61□□□□□ -1.83
CDC39P25655 HIS4YCL030C 2400 nt3.61□□□□□ -1.83
CDC39P25655 DRS1YLL008W 2259 nt3.6□□□□□ -1.83
CDC39P25655 THI13YDL244W 1023 nt3.6□□□□□ -1.83
CDC39P25655 MAG1YER142C 891 nt3.6□□□□□ -1.83
CDC39P25655 THI11YJR156C 1023 nt3.6□□□□□ -1.83
CDC39P25655 HEK2YBL032W 1146 nt3.6□□□□□ -1.83
CDC39P25655 RFA2YNL312W 822 nt3.6□□□□□ -1.83
CDC39P25655 PHO84YML123C 1764 nt3.59□□□□□ -1.83
CDC39P25655 PEX19YDL065C 1029 nt3.59□□□□□ -1.83
CDC39P25655 HSP42YDR171W 1128 nt3.59□□□□□ -1.83
CDC39P25655 UTP9YHR196W 1728 nt3.59□□□□□ -1.83
CDC39P25655 FLC1YPL221W 2382 nt3.59□□□□□ -1.84
CDC39P25655 YDR246W-AYDR246W-A 201 nt3.59□□□□□ -1.84
CDC39P25655 CDC12YHR107C 1224 nt3.59□□□□□ -1.84
CDC39P25655 ARP1YHR129C 1155 nt3.59□□□□□ -1.84
CDC39P25655 GMH1YKR030W 822 nt3.59□□□□□ -1.84
CDC39P25655 CDC42YLR229C 576 nt3.59□□□□□ -1.84
CDC39P25655 MKC7YDR144C 1791 nt3.59□□□□□ -1.84
CDC39P25655 RBA50YDR527W 1320 nt3.59□□□□□ -1.84
CDC39P25655 YMD8YML038C 1329 nt3.59□□□□□ -1.84
CDC39P25655 TRM11YOL124C 1302 nt3.59□□□□□ -1.84
CDC39P25655 YCR006CYCR006C 474 nt3.58□□□□□ -1.84
CDC39P25655 YDR161WYDR161W 1164 nt3.58□□□□□ -1.84
CDC39P25655 ECT1YGR007W 972 nt3.58□□□□□ -1.84
CDC39P25655 CAX4YGR036C 720 nt3.58□□□□□ -1.84
CDC39P25655 RDN5-1RDN5-1 121 nt3.58□□□□□ -1.84
CDC39P25655 RDN5-6RDN5-6 121 nt3.58□□□□□ -1.84
CDC39P25655 YLR346CYLR346C 306 nt3.58□□□□□ -1.84
CDC39P25655 AST1YBL069W 1290 nt3.58□□□□□ -1.84
CDC39P25655 SFI1YLL003W 2841 nt3.58□□□□□ -1.84
CDC39P25655 RCM1YNL022C 1473 nt3.58□□□□□ -1.84
CDC39P25655 YDR396WYDR396W 501 nt3.58□□□□□ -1.84
CDC39P25655 YDR445CYDR445C 408 nt3.58□□□□□ -1.84
CDC39P25655 YGL199CYGL199C 471 nt3.58□□□□□ -1.84
CDC39P25655 YJR085CYJR085C 318 nt3.58□□□□□ -1.84
CDC39P25655 PBN1YCL052C 1251 nt3.58□□□□□ -1.84
CDC39P25655 EMP47YFL048C 1338 nt3.57□□□□□ -1.84
CDC39P25655 SSH1YBR283C 1473 nt3.57□□□□□ -1.84
CDC39P25655 YDR056CYDR056C 618 nt3.57□□□□□ -1.84
CDC39P25655 GAL11YOL051W 3246 nt3.57□□□□□ -1.84
CDC39P25655 TRF5YNL299W 1929 nt3.57□□□□□ -1.84
CDC39P25655 SSL1YLR005W 1386 nt3.57□□□□□ -1.84
CDC39P25655 PRP28YDR243C 1767 nt3.56□□□□□ -1.84
CDC39P25655 TOG1YER184C 2385 nt3.56□□□□□ -1.84
CDC39P25655 MNN4YKL201C 3537 nt3.56□□□□□ -1.84
CDC39P25655 LTV1YKL143W 1392 nt3.56□□□□□ -1.84
CDC39P25655 COQ4YDR204W 1008 nt3.56□□□□□ -1.84
CDC39P25655 TFB3YDR460W 966 nt3.56□□□□□ -1.84
CDC39P25655 YML031C-AYML031C-A 336 nt3.56□□□□□ -1.84
CDC39P25655 VPS69YPR087W 321 nt3.56□□□□□ -1.84
CDC39P25655 HRK1YOR267C 2280 nt3.56□□□□□ -1.84
CDC39P25655 GCR1YPL075W 2358 nt3.56□□□□□ -1.84
CDC39P25655 FAR8YMR029C 1572 nt3.56□□□□□ -1.84
CDC39P25655 YOL153CYOL153C 1746 nt3.55□□□□□ -1.84
CDC39P25655 HEM15YOR176W 1182 nt3.55□□□□□ -1.84
CDC39P25655 RRN11YML043C 1524 nt3.55□□□□□ -1.84
CDC39P25655 THI7YLR237W 1797 nt3.55□□□□□ -1.84
CDC39P25655 ATH1YPR026W 3636 nt3.55□□□□□ -1.84
CDC39P25655 MSK1YNL073W 1731 nt3.55□□□□□ -1.84
CDC39P25655 YDL032WYDL032W 312 nt3.55□□□□□ -1.84
CDC39P25655 BUD25YER014C-A 462 nt3.55□□□□□ -1.84
CDC39P25655 YIL171WYIL171W 330 nt3.55□□□□□ -1.84
CDC39P25655 COX17YLL009C 210 nt3.55□□□□□ -1.84
CDC39P25655 GAS3YMR215W 1575 nt3.55□□□□□ -1.84
CDC39P25655 MRS2YOR334W 1413 nt3.54□□□□□ -1.84
CDC39P25655 AFT1YGL071W 2073 nt3.54□□□□□ -1.84
CDC39P25655 PTC1YDL006W 846 nt3.54□□□□□ -1.84
CDC39P25655 YIR020W-AYIR020W-A 243 nt3.54□□□□□ -1.84
CDC39P25655 RAD16YBR114W 2373 nt3.54□□□□□ -1.84
CDC39P25655 SRP72YPL210C 1923 nt3.54□□□□□ -1.84
CDC39P25655 RPB7YDR404C 516 nt3.53□□□□□ -1.84
CDC39P25655 ASC1YMR116C 960 nt3.53□□□□□ -1.84
CDC39P25655 RPO26YPR187W 468 nt3.53□□□□□ -1.84
CDC39P25655 XKS1YGR194C 1803 nt3.53□□□□□ -1.84
CDC39P25655 PTA1YAL043C 2358 nt3.53□□□□□ -1.84
CDC39P25655 YLR154W-BYLR154W-B 165 nt3.53□□□□□ -1.84
CDC39P25655 YPL025CYPL025C 558 nt3.53□□□□□ -1.84
CDC39P25655 FAR10YLR238W 1437 nt3.53□□□□□ -1.84
CDC39P25655 SDS3YIL084C 984 nt3.52□□□□□ -1.85
CDC39P25655 KRE9YJL174W 831 nt3.52□□□□□ -1.85
CDC39P25655 YJL218WYJL218W 591 nt3.52□□□□□ -1.85
CDC39P25655 MCM1YMR043W 861 nt3.52□□□□□ -1.85
CDC39P25655 VPS68YOL129W 555 nt3.52□□□□□ -1.85
CDC39P25655 TPA1YER049W 1935 nt3.52□□□□□ -1.85
CDC39P25655 THI20YOL055C 1656 nt3.52□□□□□ -1.85
CDC39P25655 PDE1YGL248W 1110 nt3.52□□□□□ -1.85
CDC39P25655 PEX32YBR168W 1242 nt3.52□□□□□ -1.85
CDC39P25655 SUL2YLR092W 2682 nt3.51□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms