Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.44■□□□□ 0.7
CCL1P22362 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.44■□□□□ 0.7
CCL1P22362 AC137630.3-201ENST00000607245 391 ntBASIC19.44■□□□□ 0.7
CCL1P22362 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.44■□□□□ 0.7
CCL1P22362 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL1P22362 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.43■□□□□ 0.7
CCL1P22362 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL1P22362 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.43■□□□□ 0.7
CCL1P22362 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.43■□□□□ 0.7
CCL1P22362 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL1P22362 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL1P22362 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCL1P22362 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCL1P22362 YBX1P4-201ENST00000392794 808 ntBASIC19.42■□□□□ 0.7
CCL1P22362 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.42■□□□□ 0.7
CCL1P22362 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL1P22362 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.42■□□□□ 0.7
CCL1P22362 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.42■□□□□ 0.7
CCL1P22362 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCL1P22362 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCL1P22362 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCL1P22362 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL1P22362 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL1P22362 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
CCL1P22362 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL1P22362 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCL1P22362 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.41■□□□□ 0.7
CCL1P22362 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL1P22362 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL1P22362 ESRRAP2-201ENST00000418437 1549 ntBASIC19.41■□□□□ 0.7
CCL1P22362 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.4■□□□□ 0.7
CCL1P22362 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL1P22362 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL1P22362 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL1P22362 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL1P22362 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.4■□□□□ 0.7
CCL1P22362 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.4■□□□□ 0.7
CCL1P22362 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCL1P22362 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.4■□□□□ 0.7
CCL1P22362 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.4■□□□□ 0.7
CCL1P22362 AL353803.4-201ENST00000565882 1934 ntBASIC19.4■□□□□ 0.7
CCL1P22362 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCL1P22362 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL1P22362 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCL1P22362 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCL1P22362 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CCL1P22362 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCL1P22362 GUSBP5-202ENST00000510805 1989 ntBASIC19.39■□□□□ 0.7
CCL1P22362 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCL1P22362 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.39■□□□□ 0.69
CCL1P22362 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.39■□□□□ 0.69
CCL1P22362 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.39■□□□□ 0.69
CCL1P22362 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.39■□□□□ 0.69
CCL1P22362 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCL1P22362 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCL1P22362 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.38■□□□□ 0.69
CCL1P22362 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCL1P22362 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCL1P22362 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.38■□□□□ 0.69
CCL1P22362 KRT8P33-201ENST00000508125 1423 ntBASIC19.38■□□□□ 0.69
CCL1P22362 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CCL1P22362 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCL1P22362 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCL1P22362 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCL1P22362 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.37■□□□□ 0.69
CCL1P22362 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.37■□□□□ 0.69
CCL1P22362 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL1P22362 ECEL1P1-201ENST00000373592 1742 ntBASIC19.37■□□□□ 0.69
CCL1P22362 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CCL1P22362 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.37■□□□□ 0.69
CCL1P22362 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCL1P22362 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL1P22362 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCL1P22362 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL1P22362 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.37■□□□□ 0.69
CCL1P22362 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.37■□□□□ 0.69
CCL1P22362 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.37■□□□□ 0.69
CCL1P22362 AL031848.2-201ENST00000607670 837 ntBASIC19.37■□□□□ 0.69
CCL1P22362 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.37■□□□□ 0.69
CCL1P22362 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.37■□□□□ 0.69
CCL1P22362 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL1P22362 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.37■□□□□ 0.69
CCL1P22362 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.37■□□□□ 0.69
CCL1P22362 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.37■□□□□ 0.69
CCL1P22362 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL1P22362 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCL1P22362 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL1P22362 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CCL1P22362 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL1P22362 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CCL1P22362 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL1P22362 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL1P22362 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.36■□□□□ 0.69
CCL1P22362 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.36■□□□□ 0.69
CCL1P22362 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL1P22362 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.36■□□□□ 0.69
CCL1P22362 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL1P22362 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCL1P22362 AC144652.1-201ENST00000609974 1624 ntBASIC19.36■□□□□ 0.69
CCL1P22362 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms